(20 nodes) Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein network (Ruminococcus torques)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CUQ84220.1	Maltose-binding periplasmic proteins/domains. (451 aa)
	ugpA_1	Sn-glycerol-3-phosphate transport system permease protein ugpA. (280 aa)
	ycjP_1	Inner membrane ABC transporter permease protein ycjP. (276 aa)
	CUQ86206.1	P39. (430 aa)
	ugpA_2	Sn-glycerol-3-phosphate transport system permease protein ugpA. (292 aa)
	malG	Maltose transport system permease protein malG. (281 aa)
	CUQ88880.1	Uncharacterised protein. (559 aa)
	ycjP_2	Inner membrane ABC transporter permease protein ycjP. (298 aa)
	ycjO	Inner membrane ABC transporter permease protein ycjO. (312 aa)
	bglB_2	Thermostable beta-glucosidase B. (813 aa)
	ycjP_3	Inner membrane ABC transporter permease protein ycjP. (282 aa)
	ugpA_3	Sn-glycerol-3-phosphate transport system permease protein ugpA. (318 aa)
	CUQ90267.1	Uncharacterised protein. (459 aa)
	CUQ90277.1	Cellobiose phosphorylase. (899 aa)
	CUQ90282.1	Cellobiose phosphorylase. (804 aa)
	ycjP_4	Inner membrane ABC transporter permease protein ycjP. (278 aa)
	ugpA_4	Sn-glycerol-3-phosphate transport system permease protein ugpA. (280 aa)
	CUQ90623.1	Maltose-binding periplasmic proteins/domains. (445 aa)
	ugpC	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (370 aa)
	malK	Maltose/maltodextrin import ATP-binding protein MalK. (218 aa)

Your Current Organism:

Ruminococcus torques

NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUQ84220.1	CUQ86206.1	ERS852502_00871	ERS852502_01297	Maltose-binding periplasmic proteins/domains.	P39.	0.900
CUQ84220.1	CUQ90623.1	ERS852502_00871	ERS852502_02244	Maltose-binding periplasmic proteins/domains.	Maltose-binding periplasmic proteins/domains.	0.905
CUQ84220.1	malG	ERS852502_00871	ERS852502_01299	Maltose-binding periplasmic proteins/domains.	Maltose transport system permease protein malG.	0.917
CUQ84220.1	malK	ERS852502_00871	ERS852502_02797	Maltose-binding periplasmic proteins/domains.	Maltose/maltodextrin import ATP-binding protein MalK.	0.923
CUQ84220.1	ugpA_1	ERS852502_00871	ERS852502_00872	Maltose-binding periplasmic proteins/domains.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.986
CUQ84220.1	ugpA_2	ERS852502_00871	ERS852502_01298	Maltose-binding periplasmic proteins/domains.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.915
CUQ84220.1	ugpA_3	ERS852502_00871	ERS852502_02137	Maltose-binding periplasmic proteins/domains.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.528
CUQ84220.1	ugpA_4	ERS852502_00871	ERS852502_02243	Maltose-binding periplasmic proteins/domains.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.976
CUQ84220.1	ugpC	ERS852502_00871	ERS852502_02326	Maltose-binding periplasmic proteins/domains.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.	0.923
CUQ84220.1	ycjP_1	ERS852502_00871	ERS852502_00873	Maltose-binding periplasmic proteins/domains.	Inner membrane ABC transporter permease protein ycjP.	0.986
CUQ84220.1	ycjP_2	ERS852502_00871	ERS852502_01854	Maltose-binding periplasmic proteins/domains.	Inner membrane ABC transporter permease protein ycjP.	0.537
CUQ84220.1	ycjP_3	ERS852502_00871	ERS852502_02136	Maltose-binding periplasmic proteins/domains.	Inner membrane ABC transporter permease protein ycjP.	0.537
CUQ84220.1	ycjP_4	ERS852502_00871	ERS852502_02242	Maltose-binding periplasmic proteins/domains.	Inner membrane ABC transporter permease protein ycjP.	0.976
CUQ86206.1	CUQ84220.1	ERS852502_01297	ERS852502_00871	P39.	Maltose-binding periplasmic proteins/domains.	0.900
CUQ86206.1	CUQ90623.1	ERS852502_01297	ERS852502_02244	P39.	Maltose-binding periplasmic proteins/domains.	0.900
CUQ86206.1	malG	ERS852502_01297	ERS852502_01299	P39.	Maltose transport system permease protein malG.	0.994
CUQ86206.1	malK	ERS852502_01297	ERS852502_02797	P39.	Maltose/maltodextrin import ATP-binding protein MalK.	0.923
CUQ86206.1	ugpA_1	ERS852502_01297	ERS852502_00872	P39.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.927
CUQ86206.1	ugpA_2	ERS852502_01297	ERS852502_01298	P39.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.993
CUQ86206.1	ugpA_3	ERS852502_01297	ERS852502_02137	P39.	Sn-glycerol-3-phosphate transport system permease protein ugpA.	0.528