(25 nodes) Mixed, incl. Prp19 complex, and Generation of catalytic spliceosome for second transesterification step network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9WW30_ZYMTI	Uncharacterized protein. (206 aa)
	F9WY92_ZYMTI	WD_REPEATS_REGION domain-containing protein. (509 aa)
	F9WY95_ZYMTI	RRM domain-containing protein. (147 aa)
	F9WZ65_ZYMTI	MI domain-containing protein. (570 aa)
	F9X0K8_ZYMTI	Uncharacterized protein. (678 aa)
	F9X2R9_ZYMTI	Uncharacterized protein. (320 aa)
	F9X4B3_ZYMTI	Uncharacterized protein. (1243 aa)
	F9X5H6_ZYMTI	Uncharacterized protein. (241 aa)
	F9X6Y8_ZYMTI	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1430 aa)
	F9X727_ZYMTI	Uncharacterized protein. (310 aa)
	F9X7A4_ZYMTI	RRM domain-containing protein. (392 aa)
	F9X7J3_ZYMTI	Uncharacterized protein. (243 aa)
	F9XAQ2_ZYMTI	WD_REPEATS_REGION domain-containing protein. (502 aa)
	F9XCH2_ZYMTI	Helicase C-terminal domain-containing protein. (570 aa)
	F9XH34_ZYMTI	Uncharacterized protein. (410 aa)
	F9XHI1_ZYMTI	SKIP_SNW domain-containing protein. (590 aa)
	F9XID0_ZYMTI	Uncharacterized protein. (148 aa)
	F9XII3_ZYMTI	Uncharacterized protein. (260 aa)
	F9XIX2_ZYMTI	Uncharacterized protein. (841 aa)
	F9XJM9_ZYMTI	DUF1716 domain-containing protein. (586 aa)
	F9XKC0_ZYMTI	S1 motif domain-containing protein. (777 aa)
	F9XKE9_ZYMTI	Uncharacterized protein. (774 aa)
	F9XL08_ZYMTI	Cwf21 domain-containing protein. (167 aa)
	F9XQ80_ZYMTI	CCHC-type domain-containing protein. (461 aa)
	F9XQC4_ZYMTI	Cir_N domain-containing protein. (387 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9WW30_ZYMTI	F9WY92_ZYMTI	F9WW30	F9WY92	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
F9WW30_ZYMTI	F9WY95_ZYMTI	F9WW30	F9WY95	Uncharacterized protein.	RRM domain-containing protein.	0.858
F9WW30_ZYMTI	F9WZ65_ZYMTI	F9WW30	F9WZ65	Uncharacterized protein.	MI domain-containing protein.	0.501
F9WW30_ZYMTI	F9X0K8_ZYMTI	F9WW30	F9X0K8	Uncharacterized protein.	Uncharacterized protein.	0.931
F9WW30_ZYMTI	F9X4B3_ZYMTI	F9WW30	F9X4B3	Uncharacterized protein.	Uncharacterized protein.	0.999
F9WW30_ZYMTI	F9X5H6_ZYMTI	F9WW30	F9X5H6	Uncharacterized protein.	Uncharacterized protein.	0.995
F9WW30_ZYMTI	F9X6Y8_ZYMTI	F9WW30	F9X6Y8	Uncharacterized protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.963
F9WW30_ZYMTI	F9X727_ZYMTI	F9WW30	F9X727	Uncharacterized protein.	Uncharacterized protein.	0.926
F9WW30_ZYMTI	F9X7A4_ZYMTI	F9WW30	F9X7A4	Uncharacterized protein.	RRM domain-containing protein.	0.921
F9WW30_ZYMTI	F9X7J3_ZYMTI	F9WW30	F9X7J3	Uncharacterized protein.	Uncharacterized protein.	0.824
F9WW30_ZYMTI	F9XAQ2_ZYMTI	F9WW30	F9XAQ2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.994
F9WW30_ZYMTI	F9XCH2_ZYMTI	F9WW30	F9XCH2	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.542
F9WW30_ZYMTI	F9XH34_ZYMTI	F9WW30	F9XH34	Uncharacterized protein.	Uncharacterized protein.	0.982
F9WW30_ZYMTI	F9XHI1_ZYMTI	F9WW30	F9XHI1	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.955
F9WW30_ZYMTI	F9XID0_ZYMTI	F9WW30	F9XID0	Uncharacterized protein.	Uncharacterized protein.	0.932
F9WW30_ZYMTI	F9XII3_ZYMTI	F9WW30	F9XII3	Uncharacterized protein.	Uncharacterized protein.	0.860
F9WW30_ZYMTI	F9XIX2_ZYMTI	F9WW30	F9XIX2	Uncharacterized protein.	Uncharacterized protein.	0.971
F9WW30_ZYMTI	F9XJM9_ZYMTI	F9WW30	F9XJM9	Uncharacterized protein.	DUF1716 domain-containing protein.	0.967
F9WW30_ZYMTI	F9XKE9_ZYMTI	F9WW30	F9XKE9	Uncharacterized protein.	Uncharacterized protein.	0.999
F9WW30_ZYMTI	F9XL08_ZYMTI	F9WW30	F9XL08	Uncharacterized protein.	Cwf21 domain-containing protein.	0.400