(5 nodes) Elg1 RFC-like complex network (Zymoseptoria tritici IPO323)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F9X066_ZYMTI	Uncharacterized protein. (696 aa)
	F9X9A0_ZYMTI	AAA domain-containing protein. (408 aa)
	F9XA66_ZYMTI	AAA domain-containing protein. (357 aa)
	F9XI34_ZYMTI	AAA domain-containing protein. (460 aa)
	F9XKQ1_ZYMTI	AAA domain-containing protein. (351 aa)

Your Current Organism:

Zymoseptoria tritici IPO323

NCBI taxonomy Id: 336722
Other names: Mycosphaerella graminicola IPO323, Z. tritici IPO323

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F9X066_ZYMTI	F9X9A0_ZYMTI	F9X066	F9X9A0	Uncharacterized protein.	AAA domain-containing protein.	0.999
F9X066_ZYMTI	F9XA66_ZYMTI	F9X066	F9XA66	Uncharacterized protein.	AAA domain-containing protein.	0.999
F9X066_ZYMTI	F9XI34_ZYMTI	F9X066	F9XI34	Uncharacterized protein.	AAA domain-containing protein.	0.999
F9X066_ZYMTI	F9XKQ1_ZYMTI	F9X066	F9XKQ1	Uncharacterized protein.	AAA domain-containing protein.	0.999
F9X9A0_ZYMTI	F9X066_ZYMTI	F9X9A0	F9X066	AAA domain-containing protein.	Uncharacterized protein.	0.999
F9X9A0_ZYMTI	F9XA66_ZYMTI	F9X9A0	F9XA66	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9X9A0_ZYMTI	F9XI34_ZYMTI	F9X9A0	F9XI34	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9X9A0_ZYMTI	F9XKQ1_ZYMTI	F9X9A0	F9XKQ1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XA66_ZYMTI	F9X066_ZYMTI	F9XA66	F9X066	AAA domain-containing protein.	Uncharacterized protein.	0.999
F9XA66_ZYMTI	F9X9A0_ZYMTI	F9XA66	F9X9A0	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XA66_ZYMTI	F9XI34_ZYMTI	F9XA66	F9XI34	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XA66_ZYMTI	F9XKQ1_ZYMTI	F9XA66	F9XKQ1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XI34_ZYMTI	F9X066_ZYMTI	F9XI34	F9X066	AAA domain-containing protein.	Uncharacterized protein.	0.999
F9XI34_ZYMTI	F9X9A0_ZYMTI	F9XI34	F9X9A0	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XI34_ZYMTI	F9XA66_ZYMTI	F9XI34	F9XA66	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XI34_ZYMTI	F9XKQ1_ZYMTI	F9XI34	F9XKQ1	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XKQ1_ZYMTI	F9X066_ZYMTI	F9XKQ1	F9X066	AAA domain-containing protein.	Uncharacterized protein.	0.999
F9XKQ1_ZYMTI	F9X9A0_ZYMTI	F9XKQ1	F9X9A0	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XKQ1_ZYMTI	F9XA66_ZYMTI	F9XKQ1	F9XA66	AAA domain-containing protein.	AAA domain-containing protein.	0.999
F9XKQ1_ZYMTI	F9XI34_ZYMTI	F9XKQ1	F9XI34	AAA domain-containing protein.	AAA domain-containing protein.	0.999