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| | Ppro_1787 | KEGG: gme:Gmet_2390 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase. (428 aa) |
| | Ppro_0949 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (482 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (450 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (370 aa) |
| | Ppro_0014 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (469 aa) |
| | Ppro_0025 | KEGG: gme:Gmet_3009 hypothetical protein. (296 aa) |
| | Ppro_0072 | PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pca:Pcar_0660 cytidine and deoxycytidylate deaminase family protein. (204 aa) |
| | Ppro_0109 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein. (258 aa) |
| | Ppro_0121 | PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: gsu:GSU0236 hypothetical protein. (137 aa) |
| | Ppro_0134 | KEGG: gsu:GSU2320 hypothetical protein. (203 aa) |
| | Ppro_0144 | PFAM: regulatory protein, TetR; KEGG: eba:ebA6247 transcriptional regulator, TetR family. (202 aa) |
| | Ppro_0149 | KEGG: gsu:GSU2956 redox-active disulfide protein 2. (75 aa) |
| | Ppro_0151 | PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: gsu:GSU2958 thiol:disulfide interchange protein, putative. (228 aa) |
| | Ppro_0161 | PFAM: beta-lactamase domain protein; KEGG: pai:PAE0820 mRNA 3'-end processing factor, conjectural. (430 aa) |
| | Ppro_0163 | Hypothetical protein. (879 aa) |
| | Ppro_0180 | Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (91 aa) |
| | Ppro_0183 | PFAM: protein of unknown function DUF861, cupin_3; KEGG: mca:MCA0659 hypothetical protein. (91 aa) |
| | Ppro_0189 | PFAM: protein of unknown function DUF159; KEGG: ava:Ava_3892 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (238 aa) |
| | Ppro_0207 | PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: gsu:GSU2158 CobS protein, putative. (307 aa) |
| | Ppro_0215 | PFAM: zinc finger, CHC2-family protein; KEGG: gsu:GSU2167 CHC2 zinc finger domain protein. (171 aa) |
| | Ppro_0216 | PFAM: DNA repair protein RadC; KEGG: gsu:GSU2168 DNA repair protein RadC; Belongs to the UPF0758 family. (163 aa) |
| | Ppro_0217 | PFAM: filamentation induced by cAMP protein Fic; KEGG: neu:NE0251 hypothetical protein. (508 aa) |
| | Ppro_0233 | Hypothetical protein. (87 aa) |
| | rpmH | PFAM: ribosomal protein L34; KEGG: gme:Gmet_3564 hypothetical protein; Belongs to the bacterial ribosomal protein bL34 family. (49 aa) |
| | nadD | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (221 aa) |
| | Ppro_3582 | PFAM: DNA repair protein RadC; KEGG: gsu:GSU0386 DNA repair protein RadC; Belongs to the UPF0758 family. (229 aa) |
| | Ppro_3564 | KEGG: ade:Adeh_1839 hypothetical protein. (734 aa) |
| | Ppro_3512 | PFAM: AMMECR1 domain protein; KEGG: gsu:GSU1107 conserved hypothetical protein TIGR00296. (182 aa) |
| | Ppro_3511 | KEGG: gsu:GSU0580 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; Belongs to the PEP-utilizing enzyme family. (885 aa) |
| | Ppro_3483 | PFAM: AMP-dependent synthetase and ligase; KEGG: gme:Gmet_1469 AMP-dependent synthetase and ligase. (620 aa) |
| | nifH | Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (288 aa) |
| | Ppro_3462 | ADP-ribosyl-(dinitrogen reductase) hydrolase; KEGG: gme:Gmet_0680 ADP-ribosylation/crystallin J1; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1. (301 aa) |
| | Ppro_3460 | PFAM: transcriptional activator domain; KEGG: neu:NE1994 TPR repeat. (1061 aa) |
| | Ppro_3457 | PFAM: GCN5-related N-acetyltransferase; KEGG: mac:MA3114 acetyltransferase (GNAT) family protein. (153 aa) |
| | Ppro_3413 | PFAM: beta-lactamase domain protein; KEGG: gsu:GSU2465 metallo-beta-lactamase family protein. (255 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (244 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (436 aa) |
| | Ppro_3337 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gme:Gmet_3216 TPR repeat protein. (361 aa) |
| | Ppro_3331 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU2601 TPR domain/SEC-C motif domain protein. (633 aa) |
| | Ppro_3329 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gme:Gmet_2403 tetratricopeptide TPR_4. (397 aa) |
| | Ppro_3327 | PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gme:Gmet_3536 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (256 aa) |
| | smc | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1176 aa) |
| | rny | Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (521 aa) |
| | Ppro_3278 | PFAM: peptidase M48, Ste24p; KEGG: sat:SYN_02199 Zn-dependent protease with chaperone function. (265 aa) |
| | Ppro_3277 | PFAM: Ankyrin; KEGG: gme:Gmet_0162 ankyrin. (140 aa) |
| | Ppro_3226 | TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: pca:Pcar_1354 cation-transporting ATPase. (904 aa) |
| | argB | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (292 aa) |
| | Ppro_3149 | KEGG: gme:Gmet_0881 hypothetical protein. (271 aa) |
| | Ppro_3126 | PFAM: DnaB domain protein helicase, C-terminal domain protein; KEGG: ilo:IL1933 replicative DNA helicase. (419 aa) |
| | Ppro_3125 | KEGG: sgl:SG1178 hypothetical protein. (256 aa) |
| | Ppro_3113 | PFAM: protein of unknown function DUF124; KEGG: xoo:XOO4517 hypothetical protein. (327 aa) |
| | Ppro_3110 | PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: pca:Pcar_0903 putative short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa) |
| | rplM | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | rpsI | PFAM: ribosomal protein S9; KEGG: pca:Pcar_1899 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (346 aa) |
| | Ppro_3076 | PFAM: heat shock protein Hsp20; CS; KEGG: gme:Gmet_2986 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (148 aa) |
| | rpsU | PFAM: ribosomal protein S21; KEGG: gme:Gmet_0391 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (65 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (584 aa) |
| | hppA | V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (684 aa) |
| | Ppro_2940 | KEGG: gme:Gmet_3417 MglA protein. (195 aa) |
| | rnhA | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (163 aa) |
| | Ppro_2934 | PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: gme:Gmet_0936 HNH endonuclease. (102 aa) |
| | recO | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. (246 aa) |
| | Ppro_2882 | PFAM: RNP-1 like RNA-binding protein; KEGG: gme:Gmet_2631 RNA-binding region RNP-1. (108 aa) |
| | Ppro_2880 | PFAM: lipopolysaccharide biosynthesis; KEGG: tma:TM0644 hypothetical protein. (487 aa) |
| | Ppro_2872 | PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcl:ABC3257 short-chain dehydrogenase. (222 aa) |
| | Ppro_2855 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein. (258 aa) |
| | Ppro_2845 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (805 aa) |
| | Ppro_2801 | PFAM: Cupin 2, conserved barrel domain protein; KEGG: gsu:GSU0224 hypothetical protein. (105 aa) |
| | Ppro_2765 | Nucleoside-diphosphate-sugar epimerase-like protein; KEGG: mag:amb2083 predicted nucleoside-diphosphate-sugar epimerase. (366 aa) |
| | Ppro_2761 | KEGG: bme:BMEI0212 hypothetical protein. (283 aa) |
| | Ppro_2753 | Nucleoside-diphosphate-sugar epimerase-like protein; KEGG: mag:amb2083 predicted nucleoside-diphosphate-sugar epimerase. (380 aa) |
| | Ppro_2733 | PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: gme:Gmet_0994 SNF2-related:helicase-like:zinc finger, SWIM-type. (1164 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (322 aa) |
| | Ppro_2696 | KEGG: gsu:GSU1498 hypothetical protein. (460 aa) |
| | Ppro_2665 | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa) |
| | Ppro_2656 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gme:Gmet_1233 intermediate filament protein. (568 aa) |
| | rpmE | LSU ribosomal protein L31P; Binds the 23S rRNA. (66 aa) |
| | Ppro_2646 | N-acetylglutamate synthase; PFAM: GCN5-related N-acetyltransferase; KEGG: gme:Gmet_0946 GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. (149 aa) |
| | Ppro_2628 | PFAM: Cupin 2, conserved barrel domain protein; KEGG: syn:slr2101 hypothetical protein. (157 aa) |
| | priA | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (744 aa) |
| | Ppro_2609 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. (392 aa) |
| | speA | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (635 aa) |
| | Ppro_2605 | PFAM: heat shock protein Hsp20; KEGG: gsu:GSU3192 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (144 aa) |
| | purD | Phosphoribosylamine--glycine ligase; KEGG: gme:Gmet_2904 phosphoribosylglycinamide synthetase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; Belongs to the GARS family. (423 aa) |
| | Ppro_2576 | Dipeptidase, Metallo peptidase, MEROPS family M19; PFAM: peptidase M19, renal dipeptidase; KEGG: gme:Gmet_3505 peptidase M19, renal dipeptidase. (344 aa) |
| | sbcD | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (410 aa) |
| | Ppro_2564 | PFAM: NUDIX hydrolase; KEGG: ppr:PBPRA1244 hypothetical protein. (173 aa) |
| | Ppro_2517 | FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: gme:Gmet_1388 riboflavin kinase / FAD synthetase; Belongs to the ribF family. (325 aa) |
| | Ppro_2510 | TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: gvi:glr4215 cation-transporting ATPase PacL homolog. (871 aa) |
| | Ppro_2503 | PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: eba:ebD26 hypothetical protein. (162 aa) |
| | Ppro_2491 | PFAM: ROSMUCR transcriptional regulator; KEGG: gsu:GSU1863 transcriptional regulator, Ros/MucR family. (167 aa) |
| | Ppro_2485 | KEGG: gsu:GSU1938 hypothetical protein. (175 aa) |
| | Ppro_2478 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU1987 TPR domain protein. (884 aa) |
| | Ppro_2474 | PFAM: lipopolysaccharide biosynthesis; KEGG: gsu:GSU1984 polysaccharide chain length determinant protein, putative. (499 aa) |
| | Ppro_2428 | Amidohydrolase; KEGG: gvi:glr2540 probable hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (401 aa) |
| | Ppro_2427 | PFAM: NUDIX hydrolase; KEGG: gme:Gmet_0714 NUDIX hydrolase. (301 aa) |
| | rpmB | PFAM: ribosomal protein L28; KEGG: gsu:GSU2234 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (63 aa) |
| | Ppro_2346 | DNA-directed DNA polymerase; KEGG: gsu:GSU1383 exonuclease; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease. (170 aa) |
| | Ppro_2320 | PFAM: Chromosomal replication initiator, DnaA; SMART: AAA ATPase; KEGG: gme:Gmet_0747 chromosomal replication initiator protein, DnaA; Belongs to the DnaA family. (236 aa) |
| | rpmI | PFAM: ribosomal protein L35; KEGG: gme:Gmet_1413 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | rplT | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa) |
| | Ppro_2302 | Histone family protein DNA-binding protein; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (97 aa) |
| | Ppro_2298 | KEGG: rso:RSc2483 hypothetical protein. (270 aa) |
| | Ppro_2285 | PFAM: filamentation induced by cAMP protein Fic; KEGG: gka:GK0752 huntingtin interacting protein E-like protein. (250 aa) |
| | Ppro_2280 | KEGG: pca:Pcar_1424 integration host factor, alpha subunit. (57 aa) |
| | Ppro_2277 | PFAM: DNA repair protein RadC; KEGG: gsu:GSU2168 DNA repair protein RadC; Belongs to the UPF0758 family. (166 aa) |
| | tadA | tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (181 aa) |
| | Ppro_2242 | Recombination protein MgsA; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: gme:Gmet_0939 AAA ATPase, central region. (448 aa) |
| | Ppro_2236 | PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pca:Pcar_0437 MoxR-like ATPase. (279 aa) |
| | ackA-2 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (417 aa) |
| | Ppro_2215 | PFAM: regulatory protein, TetR; KEGG: gme:Gmet_0803 transcriptional regulator, TetR family. (215 aa) |
| | Ppro_2167 | 2,3-dimethylmalate lyase; TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: pca:Pcar_0628 phosphoenolpyruvate phosphomutase. (297 aa) |
| | Ppro_2160 | Ferredoxin-dependent glutamate synthase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: pca:Pcar_2599 glutamate synthase, alpha subunit-like; Belongs to the glutamate synthase family. (547 aa) |
| | Ppro_2151 | PFAM: Rubrerythrin; KEGG: dvu:DVU2398 hypothetical protein. (154 aa) |
| | Ppro_2146 | GTP-binding protein, HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (305 aa) |
| | Ppro_2130 | PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: rso:RSc2483 hypothetical protein. (277 aa) |
| | Ppro_2129 | RecA-family ATPase-like protein; KEGG: mlo:mlr5464 hypothetical protein. (465 aa) |
| | Ppro_2101 | UDP-galactopyranose mutase; PFAM: amine oxidase; KEGG: gsu:GSU1512 amine oxidase, flavin-containing. (452 aa) |
| | Ppro_2083 | Protoporphyrin IX magnesium-chelatase; KEGG: mja:MJ0911 magnesium-chelatase subunit; PFAM: magnesium chelatase, ChlI subunit; SMART: AAA ATPase. (337 aa) |
| | Ppro_2082 | Cobaltochelatase CobN subunit; PFAM: CobN/magnesium chelatase; KEGG: mma:MM1998 cobalamin biosynthesis protein. (1297 aa) |
| | rpsB | PFAM: ribosomal protein S2; KEGG: gme:Gmet_1250 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (257 aa) |
| | Ppro_2043 | PFAM: Silent information regulator protein Sir2; KEGG: gsu:GSU3087 transcriptional regulator, Sir2 family. (272 aa) |
| | Ppro_2036 | PFAM: CBS domain containing protein; transporter-associated region; KEGG: gme:Gmet_2368 CBS:transporter-associated region. (296 aa) |
| | ybeY | Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (127 aa) |
| | Ppro_2015 | Aminotransferase, class V; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (391 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (489 aa) |
| | Ppro_2005 | PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: gme:Gmet_2451 cytochrome c biogenesis protein, transmembrane region. (243 aa) |
| | Ppro_1995 | PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gme:Gmet_0219 Orn/DAP/Arg decarboxylase 2. (439 aa) |
| | Ppro_1980 | PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: psp:PSPPH_1477 cytosine deaminase. (145 aa) |
| | Ppro_1962 | PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pho:PH0981 hypothetical protein. (323 aa) |
| | Ppro_1961 | TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pca:Pcar_0839 cation efflux system protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (437 aa) |
| | Ppro_1949 | KEGG: pca:Pcar_0171 hypothetical protein. (117 aa) |
| | Ppro_1933 | KEGG: rfr:Rfer_2360 hypothetical protein. (101 aa) |
| | Ppro_1924 | PFAM: aldehyde dehydrogenase; KEGG: pca:Pcar_1246 alcohol-acetaldehyde dehydrogenase. (445 aa) |
| | Ppro_1920 | PFAM: regulatory protein, TetR; KEGG: eba:ebA6247 transcriptional regulator, TetR family. (202 aa) |
| | Ppro_1912 | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (88 aa) |
| | Ppro_1893 | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (126 aa) |
| | Ppro_1890 | PFAM: histone family protein DNA-binding protein; KEGG: gme:Gmet_1833 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (90 aa) |
| | Ppro_1887 | PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: lip:LI0185 MoxR-like ATPases. (328 aa) |
| | Ppro_1885 | PFAM: DNA repair protein RadC; KEGG: gsu:GSU2168 DNA repair protein RadC; Belongs to the UPF0758 family. (166 aa) |
| | Ppro_1872 | Bacterial nucleoid protein Hbs; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa) |
| | Ppro_1866 | PFAM: protein of unknown function DUF159; KEGG: gsu:GSU0040 hypothetical protein; Belongs to the SOS response-associated peptidase family. (222 aa) |
| | Ppro_1863 | KEGG: cps:CPS_2856 hypothetical protein. (110 aa) |
| | Ppro_1847 | PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: bba:Bd0255 similar to ATP dependent helicase. (807 aa) |
| | Ppro_1794 | TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gme:Gmet_0858 cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (299 aa) |
| | Ppro_0286 | PFAM: acetyl-CoA hydrolase/transferase; KEGG: gme:Gmet_3044 acetyl-CoA hydrolase/transferase. (531 aa) |
| | ubiX | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (200 aa) |
| | Ppro_0295 | SMART: TRASH domain protein; KEGG: gsu:GSU2978 hypothetical protein. (84 aa) |
| | Ppro_0296 | KEGG: gme:Gmet_0495 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK. (162 aa) |
| | recR | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (197 aa) |
| | Ppro_0300 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (104 aa) |
| | Ppro_0313 | PFAM: protein of unknown function UPF0047; KEGG: dde:Dde_3175 hypothetical protein. (152 aa) |
| | Ppro_0314 | PFAM: heat shock protein Hsp20; KEGG: gsu:GSU2409 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (132 aa) |
| | Ppro_0315 | PFAM: heat shock protein Hsp20; KEGG: gsu:GSU2410 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (149 aa) |
| | Ppro_0332 | PFAM: regulatory protein, TetR; KEGG: gsu:GSU2698 transcriptional regulator, TetR family. (192 aa) |
| | Ppro_0333 | PFAM: nitrogen-fixing NifU domain protein; KEGG: pca:Pcar_2331 thioredoxin-like proteins and domains-like. (74 aa) |
| | rpmA | PFAM: ribosomal protein L27; KEGG: gsu:GSU3235 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (84 aa) |
| | rplU | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa) |
| | Ppro_0364 | KEGG: sdn:Sden_2998 hypothetical protein. (821 aa) |
| | Ppro_0380 | KEGG: gme:Gmet_0363 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (234 aa) |
| | Ppro_0416 | Sodium/proton antiporter, CPA1 family; PFAM: sodium/hydrogen exchanger; KEGG: mba:Mbar_A3070 Na(+)/H(+) antiporter; TC 2.A.36. (406 aa) |
| | Ppro_0433 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU1114 TPR domain protein. (254 aa) |
| | Ppro_0444 | KEGG: gme:Gmet_0022 hypothetical protein. (656 aa) |
| | Ppro_0450 | Ribonuclease Z; KEGG: gme:Gmet_0188 ribonuclease Z. (164 aa) |
| | nfo | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (283 aa) |
| | Ppro_0468 | PFAM: Rubrerythrin; KEGG: pca:Pcar_1315 hypothetical protein. (161 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | Ppro_0509 | SMART: helicase c2; DEAD-like helicases-like; KEGG: gme:Gmet_3167 helicase C2. (843 aa) |
| | Ppro_0523 | KEGG: gsu:GSU3302 methylmalonyl-CoA mutase, putative; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (551 aa) |
| | Ppro_0524 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: gme:Gmet_3247 transcriptional regulator, XRE family. (187 aa) |
| | Ppro_0534 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (458 aa) |
| | Ppro_0584 | Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: gme:Gmet_3412 ParB-like partition protein; Belongs to the ParB family. (284 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (421 aa) |
| | Ppro_0642 | KEGG: chy:CHY_0443 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilizing enzyme; pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; Belongs to the PEP-utilizing enzyme family. (912 aa) |
| | Ppro_0659 | KEGG: gme:Gmet_1982 GTP-binding domain protein. (293 aa) |
| | Ppro_0660 | KEGG: gme:Gmet_1980 hypothetical protein. (213 aa) |
| | Ppro_0663 | PFAM: HhH-GPD family protein; KEGG: gme:Gmet_1973 HhH-GPD. (218 aa) |
| | rpmG | PFAM: ribosomal protein L33; KEGG: gsu:GSU2870 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (49 aa) |
| | nusG | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. (175 aa) |
| | rplK | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (140 aa) |
| | rplJ | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (174 aa) |
| | rplL | LSU ribosomal protein L12P / LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (127 aa) |
| | rpsL | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. (123 aa) |
| | rpsG | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsJ | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rplC | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (209 aa) |
| | rplD | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (207 aa) |
| | rplW | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (94 aa) |
| | rplB | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (274 aa) |
| | rpsS | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (111 aa) |
| | rpsC | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (210 aa) |
| | rplP | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (140 aa) |
| | rpmC | PFAM: ribosomal protein L29; KEGG: gme:Gmet_0634 large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (65 aa) |
| | rpsQ | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (82 aa) |
| | rplN | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rplX | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (108 aa) |
| | rplE | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsZ | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa) |
| | rpsH | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rplF | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (179 aa) |
| | rplR | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (121 aa) |
| | rpsE | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (162 aa) |
| | rpmD | PFAM: ribosomal protein L30; KEGG: chy:CHY_2291 ribosomal protein L30. (58 aa) |
| | rplO | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (147 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (220 aa) |
| | rpsM | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (122 aa) |
| | rpsK | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (131 aa) |
| | rpsD | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (208 aa) |
| | rplQ | PFAM: ribosomal protein L17; KEGG: gsu:GSU2830 ribosomal protein L17. (127 aa) |
| | Ppro_0718 | PFAM: protein of unknown function DUF1458; KEGG: gsu:GSU0195 hypothetical protein. (73 aa) |
| | Ppro_0729 | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; KEGG: gme:Gmet_0147 ferredoxin-dependent glutamate synthase. (1507 aa) |
| | Ppro_0731 | PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_0483 hypothetical protein. (112 aa) |
| | ispE | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (280 aa) |
| | rplY | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (199 aa) |
| | ychF | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (364 aa) |
| | Ppro_0750 | SSU ribosomal protein S1P; PFAM: RNA binding S1 domain protein; KEGG: gme:Gmet_1102 RNA binding S1. (407 aa) |
| | Ppro_0756 | KEGG: pca:Pcar_2758 putative alcohol dehydrogenase/acetaldehyde dehydrogenase. (451 aa) |
| | rpsF | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. (129 aa) |
| | rpsR | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (94 aa) |
| | rplI | LSU ribosomal protein L9P; Binds to the 23S rRNA. (151 aa) |
| | Ppro_0764 | PFAM: regulatory protein, TetR; KEGG: gsu:GSU3060 transcriptional regulator, TetR family. (203 aa) |
| | Ppro_0765 | TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: gsu:GSU3061 squalene-hopene cyclase. (719 aa) |
| | Ppro_0778 | PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pca:Pcar_0069 NADH oxidase-like. (386 aa) |
| | Ppro_0782 | PFAM: protein of unknown function UPF0016; KEGG: gme:Gmet_1157 hypothetical protein. (195 aa) |
| | Ppro_0801 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (104 aa) |
| | Ppro_0856 | TIGRFAM: redox-active disulfide protein 2; PFAM: glutaredoxin; KEGG: gsu:GSU2956 redox-active disulfide protein 2. (75 aa) |
| | Ppro_0862 | KEGG: cte:CT1727 glutaredoxin family protein. (76 aa) |
| | Ppro_0867 | KEGG: gme:Gmet_0679 cytochrome c family protein. (485 aa) |
| | Ppro_0905 | PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: pca:Pcar_2667 probable 3-oxoacyl-(acyl-carrier protein) reductase. (239 aa) |
| | Ppro_0906 | KEGG: pca:Pcar_2665 hypothetical protein. (480 aa) |
| | Ppro_0957 | PFAM: Silent information regulator protein Sir2; KEGG: pca:Pcar_0631 NAD-dependent protein deacetylase SIR2 family-like. (253 aa) |
| | nusA | NusA antitermination factor; Participates in both transcription termination and antitermination. (401 aa) |
| | infB | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (921 aa) |
| | Ppro_0965 | PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: gsu:GSU1590 DHH family/DHHA1 domain protein. (319 aa) |
| | rpsO | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (88 aa) |
| | hpf | SSU ribosomal protein S30P / sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (182 aa) |
| | Ppro_1001 | KEGG: vvy:VVA1544 hypothetical protein. (1870 aa) |
| | Ppro_1003 | PFAM: NERD domain protein; KEGG: dra:DR1757 hypothetical protein. (344 aa) |
| | Ppro_1005 | SMART: HNH nuclease; KEGG: eba:ebA343 hypothetical protein. (351 aa) |
| | Ppro_1008 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein. (258 aa) |
| | Ppro_1024 | Pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase, E1 component; KEGG: pca:Pcar_0343 acetoin dehydrogenase complex, E1 component, alpha subunit. (324 aa) |
| | Ppro_1025 | PFAM: Transketolase, central region; Transketolase domain protein; KEGG: reu:Reut_B5551 transketolase, central region:transketolase, C-terminal. (333 aa) |
| | Ppro_1027 | Pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase, E1 component; KEGG: pca:Pcar_0343 acetoin dehydrogenase complex, E1 component, alpha subunit. (324 aa) |
| | Ppro_1028 | PFAM: Transketolase, central region; Transketolase domain protein; KEGG: reu:Reut_B5551 transketolase, central region:transketolase, C-terminal. (333 aa) |
| | Ppro_1058 | Rubrerythrin; KEGG: gme:Gmet_1928 rubrerythrin. (163 aa) |
| | Ppro_1061 | PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_1366 acyl-CoA hydrolase-like. (351 aa) |
| | Ppro_1080 | PFAM: GCN5-related N-acetyltransferase; KEGG: pca:Pcar_1402 L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family. (296 aa) |
| | Ppro_1091 | PFAM: metallophosphoesterase; KEGG: sat:SYN_00534 phosphoesterase. (388 aa) |
| | rplS | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (119 aa) |
| | rpsP | PFAM: ribosomal protein S16; KEGG: gsu:GSU0643 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (85 aa) |
| | Ppro_1121 | PFAM: zinc finger, CHC2-family protein; KEGG: deh:cbdb_A1485 hypothetical protein. (277 aa) |
| | Ppro_1122 | PFAM: HMG-I and HMG-Y, DNA-binding domain protein; KEGG: nwi:Nwi_1258 hypothetical protein. (572 aa) |
| | Ppro_1127 | Hypothetical protein; KEGG: cch:Cag_1453 TPR repeat. (404 aa) |
| | Ppro_1136 | KEGG: tfu:Tfu_2818 hypothetical protein. (360 aa) |
| | Ppro_1144 | PFAM: beta-lactamase domain protein; KEGG: gsu:GSU1631 metallo-beta-lactamase family protein. (256 aa) |
| | Ppro_1151 | KEGG: gsu:GSU0898 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like. (714 aa) |
| | purF | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (474 aa) |
| | Ppro_1158 | MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: sat:SYN_01529 Mg/Co/Ni transporter MgtE domain protein. (420 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (328 aa) |
| | Ppro_1181 | Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (92 aa) |
| | Ppro_1189 | Squalene-hopene cyclase; KEGG: gme:Gmet_2820 terpene synthase:squalene cyclase; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase. (679 aa) |
| | Ppro_1210 | Ethanolamine ammonia-lyase light chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pca:Pcar_0491 ethanolamine ammonia-lyase large subunit-like. (760 aa) |
| | Ppro_1232 | Cobaltochelatase CobN subunit; PFAM: CobN/magnesium chelatase; KEGG: mba:Mbar_A3731 cobalamin biosynthesis protein N. (1340 aa) |
| | Ppro_1259 | Cobaltochelatase CobN subunit; PFAM: CobN/magnesium chelatase; KEGG: cte:CT0418 cobalamin biosynthesis protein CobN. (1256 aa) |
| | Ppro_1262 | Protoporphyrin IX magnesium-chelatase; KEGG: cte:CT0421 magnesium-chelatase, subunit I family; PFAM: magnesium chelatase, ChlI subunit; SMART: AAA ATPase. (345 aa) |
| | Ppro_1267 | KEGG: cte:CT0422 CobN protein, putative. (69 aa) |
| | Ppro_1268 | PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gme:Gmet_0476 cobalamin (vitamin B12) biosynthesis CbiX protein. (127 aa) |
| | Ppro_1299 | PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: gsu:GSU3000 CbiX protein. (127 aa) |
| | Ppro_1301 | KEGG: dsy:DSY1550 hypothetical protein. (205 aa) |
| | Ppro_1320 | PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein. (258 aa) |
| | Ppro_1338 | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (157 aa) |
| | Ppro_1344 | PFAM: protein of unknown function UPF0047; KEGG: gsu:GSU2631 conserved hypothetical protein TIGR00149. (138 aa) |
| | Ppro_1350 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (579 aa) |
| | Ppro_1351 | PFAM: histone family protein DNA-binding protein; KEGG: gme:Gmet_0868 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (92 aa) |
| | Ppro_1367 | TIGRFAM: phage and plasmid primase, P4 family; PFAM: Poxvirus D5 protein; KEGG: rso:RSc3229 putative bacteriophage-related protein. (524 aa) |
| | Ppro_1386 | PFAM: Cupin 2, conserved barrel domain protein; KEGG: dps:DP0553 hypothetical protein. (116 aa) |
| | Ppro_1446 | Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: ppr:PBPRA1941 hypothetical xanthine dehydrogenase. (714 aa) |
| | Ppro_1491 | Iron-only hydrogenase maturation protein HydE; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_1607 biotin synthase. (357 aa) |
| | Ppro_1518 | PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: gsu:GSU0461 3-oxoacyl-(acyl carrier protein) reductase. (246 aa) |
| | Ppro_1519 | Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bha:BH0748 xanthine dehydrogenase. (765 aa) |
| | Ppro_1564 | TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: sat:SYN_02485 calcium-transporting ATPase. (879 aa) |
| | Ppro_1566 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gsu:GSU1762 TPR domain protein. (420 aa) |
| | Ppro_1578 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. (556 aa) |
| | Ppro_1586 | PFAM: ADP-ribosylation/Crystallin J1; KEGG: sat:SYN_02522 ADP-ribosylglycohydrolase. (253 aa) |
| | Ppro_1587 | TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: gme:Gmet_3155 glycine cleavage system T protein. (363 aa) |
| | Ppro_1598 | PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: gsu:GSU1686 cytidine/deoxycytidylate deaminase family protein. (155 aa) |
| | Ppro_1658 | KEGG: gme:Gmet_1404 hypothetical protein. (579 aa) |
| | Ppro_1682 | PFAM: glutamine synthetase, catalytic region; KEGG: dsy:DSY4406 hypothetical protein. (695 aa) |
| | rpmF | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: gme:Gmet_1597 ribosomal protein S32; Belongs to the bacterial ribosomal protein bL32 family. (61 aa) |
| | Ppro_1744 | 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa) |
| | Ppro_1755 | Hypothetical protein. (134 aa) |
| | rpsT | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (87 aa) |
| | Ppro_1781 | PFAM: histone family protein DNA-binding protein; KEGG: gme:Gmet_1833 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (91 aa) |
| | Ppro_1786 | preQ(0) biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: gme:Gmet_1657 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. (122 aa) |
