(26 nodes) ABC transporter type 1, transmembrane domain superfamily network (Aspergillus terreus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATEG_09796	Lipid A export ATP-binding/permease protein msbA. (1305 aa)
	ATEG_06843	Uncharacterized protein. (1251 aa)
	ATEG_07136	Uncharacterized protein. (1186 aa)
	ATEG_08193	Uncharacterized protein. (1339 aa)
	ATEG_08171	Multidrug resistance protein 4. (1310 aa)
	ATEG_07489	Uncharacterized protein. (1333 aa)
	ATEG_01929	Uncharacterized protein. (1547 aa)
	ATEG_01980	Uncharacterized protein. (1403 aa)
	ATEG_02255	Uncharacterized protein. (1402 aa)
	ATEG_02621	Uncharacterized protein. (829 aa)
	ATEG_03928	Uncharacterized protein. (1436 aa)
	ATEG_03320	Transporter ATM1, mitochondrial. (721 aa)
	ATEG_04667	Uncharacterized protein. (1517 aa)
	ATEG_08280	Uncharacterized protein. (1285 aa)
	ATEG_08329	Uncharacterized protein. (1533 aa)
	ATEG_08828	Uncharacterized protein. (1466 aa)
	ATEG_06549	Uncharacterized protein. (1814 aa)
	ATEG_05290	Uncharacterized protein. (887 aa)
	ATEG_05107	Uncharacterized protein. (1227 aa)
	ATEG_09018	Uncharacterized protein. (1222 aa)
	ATEG_01346	Multidrug resistance protein 3. (1290 aa)
	ATEG_00741	ATP-dependent permease MDL1. (789 aa)
	ATEG_00483	Uncharacterized protein. (707 aa)
	ATEG_00460	Uncharacterized protein. (1276 aa)
	ATEG_09424	Multidrug resistance protein 1. (1340 aa)
	ATEG_09585	Heavy metal tolerance protein. (930 aa)

Your Current Organism:

Aspergillus terreus

NCBI taxonomy Id: 341663
Other names: A. terreus NIH2624, Aspergillus terreus FGSC A1156, Aspergillus terreus NIH2624

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATEG_00460	ATEG_00741	Q0D0S4	Q0CZZ3	Uncharacterized protein.	ATP-dependent permease MDL1.	0.446
ATEG_00460	ATEG_03320	Q0D0S4	Q0CSL4	Uncharacterized protein.	Transporter ATM1, mitochondrial.	0.501
ATEG_00460	ATEG_09585	Q0D0S4	Q0C9P9	Uncharacterized protein.	Heavy metal tolerance protein.	0.471
ATEG_00483	ATEG_02621	Q0D0Q1	Q0CUL3	Uncharacterized protein.	Uncharacterized protein.	0.959
ATEG_00741	ATEG_00460	Q0CZZ3	Q0D0S4	ATP-dependent permease MDL1.	Uncharacterized protein.	0.446
ATEG_00741	ATEG_01346	Q0CZZ3	Q0CY88	ATP-dependent permease MDL1.	Multidrug resistance protein 3.	0.446
ATEG_00741	ATEG_03320	Q0CZZ3	Q0CSL4	ATP-dependent permease MDL1.	Transporter ATM1, mitochondrial.	0.772
ATEG_00741	ATEG_05290	Q0CZZ3	Q0CLZ4	ATP-dependent permease MDL1.	Uncharacterized protein.	0.446
ATEG_00741	ATEG_07136	Q0CZZ3	Q0CGQ6	ATP-dependent permease MDL1.	Uncharacterized protein.	0.446
ATEG_00741	ATEG_07489	Q0CZZ3	Q0CFP5	ATP-dependent permease MDL1.	Uncharacterized protein.	0.446
ATEG_00741	ATEG_08171	Q0CZZ3	Q0CDR3	ATP-dependent permease MDL1.	Multidrug resistance protein 4.	0.446
ATEG_00741	ATEG_09018	Q0CZZ3	Q0CBB6	ATP-dependent permease MDL1.	Uncharacterized protein.	0.446
ATEG_00741	ATEG_09424	Q0CZZ3	Q0CA60	ATP-dependent permease MDL1.	Multidrug resistance protein 1.	0.446
ATEG_00741	ATEG_09585	Q0CZZ3	Q0C9P9	ATP-dependent permease MDL1.	Heavy metal tolerance protein.	0.671
ATEG_00741	ATEG_09796	Q0CZZ3	Q0C938	ATP-dependent permease MDL1.	Lipid A export ATP-binding/permease protein msbA.	0.446
ATEG_01346	ATEG_00741	Q0CY88	Q0CZZ3	Multidrug resistance protein 3.	ATP-dependent permease MDL1.	0.446
ATEG_01346	ATEG_03320	Q0CY88	Q0CSL4	Multidrug resistance protein 3.	Transporter ATM1, mitochondrial.	0.501
ATEG_01346	ATEG_07136	Q0CY88	Q0CGQ6	Multidrug resistance protein 3.	Uncharacterized protein.	0.499
ATEG_01346	ATEG_09018	Q0CY88	Q0CBB6	Multidrug resistance protein 3.	Uncharacterized protein.	0.447
ATEG_01346	ATEG_09585	Q0CY88	Q0C9P9	Multidrug resistance protein 3.	Heavy metal tolerance protein.	0.471