STRINGSTRING
B8BW00_THAPS B8BW00_THAPS B8BX49_THAPS B8BX49_THAPS RS15B RS15B RSP1 RSP1 B8BYS7_THAPS B8BYS7_THAPS RS16 RS16 RS21 RS21 B8C0D4_THAPS B8C0D4_THAPS RS13 RS13 RS20 RS20 RS10 RS10 B8C1C2_THAPS B8C1C2_THAPS B8C1E6_THAPS B8C1E6_THAPS RS9 RS9 RS11 RS11 RS23 RS23 RS19 RS19 B8C3Y2_THAPS B8C3Y2_THAPS B8C426_THAPS B8C426_THAPS B8C4J0_THAPS B8C4J0_THAPS B8C500_THAPS B8C500_THAPS RS24 RS24 RS26 RS26 B8C720_THAPS B8C720_THAPS THAPSDRAFT_105 THAPSDRAFT_105 B8C863_THAPS B8C863_THAPS B8C8G7_THAPS B8C8G7_THAPS RS15A RS15A RS2 RS2 B8C8V9_THAPS B8C8V9_THAPS B8C985_THAPS B8C985_THAPS B8CB59_THAPS B8CB59_THAPS RS8 RS8 B8CC33_THAPS B8CC33_THAPS RS29 RS29 RS27 RS27 RS6 RS6 RS25 RS25 B8CDP0_THAPS B8CDP0_THAPS RS3A RS3A B8CFZ4_THAPS B8CFZ4_THAPS B8CGJ9_THAPS B8CGJ9_THAPS B8LCF3_THAPS B8LCF3_THAPS B8LCN2_THAPS B8LCN2_THAPS B8LD20_THAPS B8LD20_THAPS B8LDZ2_THAPS B8LDZ2_THAPS rps4 rps4 rps8 rps8 rps5 rps5 secY secY rps13 rps13 rps10 rps10 THAPS_595 THAPS_595 THAPS_7322 THAPS_7322 B8BQX0_THAPS B8BQX0_THAPS RS18 RS18 B8BUG4_THAPS B8BUG4_THAPS RS7 RS7 B8BVJ5_THAPS B8BVJ5_THAPS RS4 RS4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B8BW00_THAPSW2 domain-containing protein. (404 aa)
B8BX49_THAPSRRM domain-containing protein. (81 aa)
RS15BRS15B, ribosomal protein 15B 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS19 family. (147 aa)
RSP140S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (243 aa)
B8BYS7_THAPSUncharacterized protein. (441 aa)
RS16RS16, ribosomal protein 16 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS9 family. (143 aa)
RS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (84 aa)
B8C0D4_THAPSKH type-2 domain-containing protein. (270 aa)
RS13RS13, ribosomal protein 13 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS15 family. (151 aa)
RS20RS20, ribosomal protein 20 40S small ribosomal subunit. (124 aa)
RS10RS10, ribosomal protein 10 40S small ribosomal subunit. (104 aa)
B8C1C2_THAPSEukaryotic translation initiation factor 3 subunit A. (906 aa)
B8C1E6_THAPSEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (459 aa)
RS9RS9, ribosomal protein 9; Belongs to the universal ribosomal protein uS4 family. (190 aa)
RS11RS11, ribosomal protein 11 40S small ribosomal subunit. (165 aa)
RS23RS23, ribosomal protein 23 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS12 family. (143 aa)
RS19RS19, ribosomal protein 19 40S small ribosomal subunit. (148 aa)
B8C3Y2_THAPSEukaryotic translation initiation factor 3 subunit 8; Belongs to the eIF-3 subunit C family. (735 aa)
B8C426_THAPSEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (340 aa)
B8C4J0_THAPSTocopherol cyclase. (448 aa)
B8C500_THAPSUncharacterized protein. (537 aa)
RS24RS24, ribosomal protein 24 40S small ribosomal subunit. (137 aa)
RS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (94 aa)
B8C720_THAPSEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (513 aa)
THAPSDRAFT_105Eukaryotic translation initiation factor 2 alpha subunit. (338 aa)
B8C863_THAPSFGE-sulfatase domain-containing protein. (990 aa)
B8C8G7_THAPSUncharacterized protein. (100 aa)
RS15ARS15A, ribosomal protein 15 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
RS2RS2, ribosomal protein 2; Belongs to the universal ribosomal protein uS5 family. (262 aa)
B8C8V9_THAPSeIF2B_5 domain-containing protein. (221 aa)
B8C985_THAPSEpimerase domain-containing protein. (378 aa)
B8CB59_THAPSEukaryotic translation initiation factor 3 subunit B. (669 aa)
RS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
B8CC33_THAPSEukaryotic translation initiation factor 4A; Belongs to the DEAD box helicase family. (369 aa)
RS29RS29, ribosomal protein 29 40S small ribosomal subunit. (62 aa)
RS27RS27, ribosomal protein 27 40S small ribosomal subunit. (82 aa)
RS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (243 aa)
RS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (112 aa)
B8CDP0_THAPS40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (115 aa)
RS3A40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (259 aa)
B8CFZ4_THAPSElp3 domain-containing protein. (520 aa)
B8CGJ9_THAPSUncharacterized protein. (67 aa)
B8LCF3_THAPSPredicted protein. (123 aa)
B8LCN2_THAPSPredicted protein. (156 aa)
B8LD20_THAPSPredicted protein; Belongs to the eIF-3 subunit F family. (282 aa)
B8LDZ2_THAPSPredicted protein. (402 aa)
rps430S ribosomal protein S4, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. Belongs to the universal ribosomal protein uS4 family. (205 aa)
rps830S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. (132 aa)
rps530S ribosomal protein S5, chloroplastic; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (179 aa)
secYProtein translocase subunit SecY; The central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. (418 aa)
rps1330S ribosomal protein S13, chloroplastic; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. (123 aa)
rps1030S ribosomal protein S10, chloroplastic; Involved in the binding of tRNA to the ribosomes. (107 aa)
THAPS_595Predicted protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (140 aa)
THAPS_7322Translation initiation factor eIF-2, gamma subunit. (483 aa)
B8BQX0_THAPSEukaryotic translation initiation factor 3 subunit I. (330 aa)
RS18RS18, ribosomal protein 18 40S small ribosomal subunit; Belongs to the universal ribosomal protein uS13 family. (146 aa)
B8BUG4_THAPSEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (465 aa)
RS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (188 aa)
B8BVJ5_THAPSEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (256 aa)
RS440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
Your Current Organism:
Thalassiosira pseudonana
NCBI taxonomy Id: 35128
Other names: T. pseudonana
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