(40 nodes) Mixed, incl. Serotonin Neurotransmitter Release Cycle, and Regulation of dopamine secretion network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_030967	Ras-related protein Rab-3A. (219 aa)
	EOG090X04HR	Vesicular inhibitory amino acid transporter. (501 aa)
	APZ42_022061	Synaptotagmin-11. (517 aa)
	APZ42_029568	Chromaffin granule amine transporter. (499 aa)
	APZ42_019062	Putative Liprin-beta-2. (796 aa)
	APZ42_023165	Syntaxin-binding protein; Belongs to the STXBP/unc-18/SEC1 family. (588 aa)
	APZ42_020603	Dyslexia-associated protein. (945 aa)
	APZ42_034401	Transmembrane protein 183B. (346 aa)
	APZ42_033228	Putative Homeobox protein Hox-A1. (434 aa)
	APZ42_023544	Vesicular acetylcholine transporter-A. (637 aa)
	APZ42_027192	Kazrin. (779 aa)
	APZ42_020758	Syntaxin-1A. (305 aa)
	APZ42_024700	Vesicle-associated membrane protein 3. (94 aa)
	APZ42_018682	C2 domain-containing protein. (244 aa)
	APZ42_019810	Peripheral-type benzodiazepine receptor-associated 1-like protein. (1631 aa)
	APZ42_032784	Putative Synaptotagmin beta. (897 aa)
	APZ42_025904	Complexin. (74 aa)
	APZ42_015385	Synapsin. (568 aa)
	APZ42_013595	Putative ELKS/Rab6-interacting/CAST family member 1. (1720 aa)
	APZ42_013305	Liprin-alpha. (1255 aa)
	APZ42_013321	Putative Syntaxin; Belongs to the syntaxin family. (294 aa)
	APZ42_012929	Vesicle-associated membrane protein 8. (122 aa)
	APZ42_012862	Synaptotagmin-12/sw-like protein. (518 aa)
	APZ42_012853	Putative Synaptotagmin 7. (659 aa)
	APZ42_011995	ATP-binding cassette sub-family C member 9. (1470 aa)
	APZ42_011307	Synaptotagmin-15. (464 aa)
	APZ42_001630	MFS domain-containing protein. (125 aa)
	APZ42_032515	Synaptotagmin 1 protein, variant 2. (445 aa)
	EOG090X04X8	Vesicular glutamate transporter 2. (609 aa)
	APZ42_028179	Regulating synaptic membrane exocytosis-like protein. (697 aa)
	APZ42_028167	Regulating synaptic membrane exocytosis 2-like protein. (1032 aa)
	APZ42_028183	Regulating synaptic membrane exocytosis-like protein. (128 aa)
	APZ42_024355	ERC protein. (125 aa)
	APZ42_024354	Putative ELKS/RAB6-interacting/CAST family member. (667 aa)
	APZ42_023029	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (144 aa)
	APZ42_022340	Complexin. (86 aa)
	APZ42_022183	Protein unc-13 A. (3026 aa)
	APZ42_022192	Putative Phorbol ester/diacylglycerol-binding protein unc-13. (1074 aa)
	APZ42_019823	Putative Peripheral-type benzodiazepine receptor-associated protein. (681 aa)
	APZ42_016635	Putative Synaptotagmin 16. (547 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_001630	APZ42_012929	A0A164IUV4	A0A162RBY0	MFS domain-containing protein.	Vesicle-associated membrane protein 8.	0.518
APZ42_001630	APZ42_022183	A0A164IUV4	A0A164W4P6	MFS domain-containing protein.	Protein unc-13 A.	0.429
APZ42_001630	APZ42_022192	A0A164IUV4	A0A164W4T3	MFS domain-containing protein.	Putative Phorbol ester/diacylglycerol-binding protein unc-13.	0.429
APZ42_001630	APZ42_023029	A0A164IUV4	A0A164VA03	MFS domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.528
APZ42_001630	APZ42_023544	A0A164IUV4	A0A0P5XI13	MFS domain-containing protein.	Vesicular acetylcholine transporter-A.	0.527
APZ42_001630	APZ42_028167	A0A164IUV4	A0A164QJQ3	MFS domain-containing protein.	Regulating synaptic membrane exocytosis 2-like protein.	0.621
APZ42_001630	APZ42_028179	A0A164IUV4	A0A164QJP1	MFS domain-containing protein.	Regulating synaptic membrane exocytosis-like protein.	0.621
APZ42_001630	APZ42_028183	A0A164IUV4	A0A164QJR6	MFS domain-containing protein.	Regulating synaptic membrane exocytosis-like protein.	0.621
APZ42_001630	APZ42_029568	A0A164IUV4	A0A0P5GLC2	MFS domain-containing protein.	Chromaffin granule amine transporter.	0.519
APZ42_001630	APZ42_030967	A0A164IUV4	A0A0N8C7V6	MFS domain-containing protein.	Ras-related protein Rab-3A.	0.530
APZ42_001630	APZ42_032515	A0A164IUV4	A0A164LM42	MFS domain-containing protein.	Synaptotagmin 1 protein, variant 2.	0.539
APZ42_001630	APZ42_033228	A0A164IUV4	A0A0P5XEQ0	MFS domain-containing protein.	Putative Homeobox protein Hox-A1.	0.621
APZ42_001630	EOG090X04HR	A0A164IUV4	A0A0P4Z960	MFS domain-containing protein.	Vesicular inhibitory amino acid transporter.	0.528
APZ42_011307	APZ42_012929	A0A162SKG5	A0A162RBY0	Synaptotagmin-15.	Vesicle-associated membrane protein 8.	0.562
APZ42_011307	APZ42_013305	A0A162SKG5	A0A162QW26	Synaptotagmin-15.	Liprin-alpha.	0.466
APZ42_011307	APZ42_013321	A0A162SKG5	A0A162QWY5	Synaptotagmin-15.	Putative Syntaxin; Belongs to the syntaxin family.	0.567
APZ42_011307	APZ42_015385	A0A162SKG5	A0A162PG30	Synaptotagmin-15.	Synapsin.	0.586
APZ42_011307	APZ42_020758	A0A162SKG5	A0A0P6AU98	Synaptotagmin-15.	Syntaxin-1A.	0.567
APZ42_011307	APZ42_022183	A0A162SKG5	A0A164W4P6	Synaptotagmin-15.	Protein unc-13 A.	0.491
APZ42_011307	APZ42_022192	A0A162SKG5	A0A164W4T3	Synaptotagmin-15.	Putative Phorbol ester/diacylglycerol-binding protein unc-13.	0.491