(14 nodes) Zinc finger, ZZ-type superfamily network (Daphnia magna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016448	Dystrobrevin beta. (653 aa)
	APZ42_021853	ZZ-type zinc finger-containing protein. (413 aa)
	APZ42_016875	E3 ubiquitin-protein ligase mind-bomb. (667 aa)
	APZ42_017604	Sequestosome-1. (574 aa)
	APZ42_017625	ZZ-type domain-containing protein. (250 aa)
	APZ42_019496	Transcriptional adapter 2-beta. (629 aa)
	APZ42_027338	Putative CREB-binding protein. (2063 aa)
	APZ42_032601	Dystrobrevin alpha. (1296 aa)
	APZ42_030512	Potassium channel modulatory factor-like protein. (621 aa)
	APZ42_012988	E3 ubiquitin-protein ligase mind-bomb. (977 aa)
	APZ42_022790	Uncharacterized protein. (1061 aa)
	APZ42_025304	E3 ubiquitin-protein ligase HERC2. (4820 aa)
	APZ42_016587	Transcriptional adapter. (387 aa)
	APZ42_024919	Dystrophin. (615 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_016448	APZ42_024919	A0A0P5WTY3	A0A0P5X980	Dystrobrevin beta.	Dystrophin.	0.781
APZ42_016448	APZ42_032601	A0A0P5WTY3	A0A164LQM7	Dystrobrevin beta.	Dystrobrevin alpha.	0.781
APZ42_016587	APZ42_021853	A0A0N7ZJ05	A0A0P5T830	Transcriptional adapter.	ZZ-type zinc finger-containing protein.	0.921
APZ42_019496	APZ42_021853	A0A164Y7X0	A0A0P5T830	Transcriptional adapter 2-beta.	ZZ-type zinc finger-containing protein.	0.891
APZ42_021853	APZ42_016587	A0A0P5T830	A0A0N7ZJ05	ZZ-type zinc finger-containing protein.	Transcriptional adapter.	0.921
APZ42_021853	APZ42_019496	A0A0P5T830	A0A164Y7X0	ZZ-type zinc finger-containing protein.	Transcriptional adapter 2-beta.	0.891
APZ42_022790	APZ42_025304	A0A162C899	A0A162DDE6	Uncharacterized protein.	E3 ubiquitin-protein ligase HERC2.	0.590
APZ42_024919	APZ42_016448	A0A0P5X980	A0A0P5WTY3	Dystrophin.	Dystrobrevin beta.	0.781
APZ42_025304	APZ42_022790	A0A162DDE6	A0A162C899	E3 ubiquitin-protein ligase HERC2.	Uncharacterized protein.	0.590
APZ42_025304	APZ42_027338	A0A162DDE6	A0A164RHI9	E3 ubiquitin-protein ligase HERC2.	Putative CREB-binding protein.	0.590
APZ42_027338	APZ42_025304	A0A164RHI9	A0A162DDE6	Putative CREB-binding protein.	E3 ubiquitin-protein ligase HERC2.	0.590
APZ42_032601	APZ42_016448	A0A164LQM7	A0A0P5WTY3	Dystrobrevin alpha.	Dystrobrevin beta.	0.781