(65 nodes) Glycosphingolipid biosynthesis - lacto and neolacto series network (Daphnia magna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APZ42_016313	Solute carrier family 25 member 44; Belongs to the mitochondrial carrier (TC 2.A.29) family. (319 aa)
	APZ42_018211	Hexosyltransferase. (402 aa)
	APZ42_017859	Lactosylceramide 4-alpha-galactosyltransferase. (427 aa)
	APZ42_017138	Beta-1,4-galactosyltransferase 6. (371 aa)
	APZ42_017151	Gb3_synth domain-containing protein. (380 aa)
	APZ42_017163	Uncharacterized protein. (651 aa)
	APZ42_017281	Uncharacterized protein. (322 aa)
	APZ42_017280	Uncharacterized protein. (324 aa)
	APZ42_022820	Lactosylceramide 4-alpha-galactosyltransferase. (363 aa)
	APZ42_023376	Lactosylceramide. (718 aa)
	APZ42_027720	Uncharacterized protein. (251 aa)
	APZ42_028534	Hexosyltransferase. (505 aa)
	APZ42_029497	Putative N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2. (563 aa)
	APZ42_030161	Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4. (240 aa)
	APZ42_032073	Uncharacterized protein. (548 aa)
	APZ42_033290	Alpha4GT1. (397 aa)
	APZ42_034582	Beta4GalNAcTB. (384 aa)
	APZ42_000379	Alpha4GT1. (370 aa)
	APZ42_001627	Hexosyltransferase. (203 aa)
	APZ42_008162	Hexosyltransferase. (92 aa)
	APZ42_008164	Putative Lactosylceramide 4-alpha-galactosyltransferase. (216 aa)
	APZ42_010009	Putative Lactosylceramide 4-alpha-galactosyltransferase. (123 aa)
	APZ42_015162	Uncharacterized protein. (371 aa)
	APZ42_015165	Uncharacterized protein. (339 aa)
	APZ42_015167	Uncharacterized protein. (367 aa)
	APZ42_015948	Hexosyltransferase. (449 aa)
	APZ42_004630	Uncharacterized protein. (282 aa)
	APZ42_025551	Gb3_synth domain-containing protein. (365 aa)
	APZ42_026505	Hexosyltransferase. (408 aa)
	APZ42_029892	Uncharacterized protein. (369 aa)
	APZ42_004124	Putative Lactosylceramide 4-alpha-galactosyltransferase. (94 aa)
	APZ42_020186	Alpha-1,4-N-acetylglucosaminyltransferase. (403 aa)
	APZ42_022823	Gb3_synth domain-containing protein. (410 aa)
	APZ42_033027	Lactosylceramide 4-alpha-galactosyltransferase. (396 aa)
	APZ42_028535	Putative Lactosylceramide. (941 aa)
	APZ42_028527	Putative Lactosylceramide. (931 aa)
	APZ42_015854	Hexosyltransferase. (432 aa)
	APZ42_017282	Sulfotransferase sult. (327 aa)
	APZ42_023462	Beta-1,4-galactosyltransferase. (341 aa)
	APZ42_024026	Lactosylceramide 4-alpha-galactosyltransferase. (405 aa)
	APZ42_017225	Hexosyltransferase. (495 aa)
	APZ42_031375	Lactosylceramide. (369 aa)
	APZ42_012004	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family. (392 aa)
	APZ42_034516	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase. (547 aa)
	APZ42_015164	Sulfotransferase sult. (336 aa)
	APZ42_022884	Putative Lactosylceramide. (354 aa)
	APZ42_022801	Lactosylceramide. (369 aa)
	APZ42_015951	Hexosyltransferase. (464 aa)
	APZ42_016090	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (247 aa)
	APZ42_022802	Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4. (351 aa)
	APZ42_013635	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (330 aa)
	APZ42_029516	Hexosyltransferase. (391 aa)
	APZ42_022867	Lactosylceramide. (371 aa)
	APZ42_022825	Lactosylceramide. (332 aa)
	APZ42_017409	Hexosyltransferase. (403 aa)
	APZ42_017410	Uncharacterized protein. (366 aa)
	APZ42_016515	Uncharacterized protein. (390 aa)
	APZ42_022804	Gb3_synth domain-containing protein. (395 aa)
	APZ42_021621	Gb3_synth domain-containing protein. (266 aa)
	APZ42_021218	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (257 aa)
	APZ42_019832	Hexosyltransferase. (247 aa)
	APZ42_020082	Gb3_synth domain-containing protein. (354 aa)
	APZ42_020060	Hexosyltransferase. (424 aa)
	APZ42_020068	Gb3_synth domain-containing protein. (305 aa)
	APZ42_034089	Beta-1,4-galactosyltransferase 6. (368 aa)

Your Current Organism:

Daphnia magna

NCBI taxonomy Id: 35525
Other names: D. magna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APZ42_000379	APZ42_015854	A0A164JQ10	A0A0P5ZGD1	Alpha4GT1.	Hexosyltransferase.	0.496
APZ42_000379	APZ42_017138	A0A164JQ10	A0A164ZNK7	Alpha4GT1.	Beta-1,4-galactosyltransferase 6.	0.519
APZ42_000379	APZ42_017163	A0A164JQ10	A0A164ZP10	Alpha4GT1.	Uncharacterized protein.	0.516
APZ42_000379	APZ42_017409	A0A164JQ10	A0A164ZUQ4	Alpha4GT1.	Hexosyltransferase.	0.516
APZ42_000379	APZ42_019832	A0A164JQ10	A0A164XRK5	Alpha4GT1.	Hexosyltransferase.	0.516
APZ42_000379	APZ42_020060	A0A164JQ10	A0A164XZ74	Alpha4GT1.	Hexosyltransferase.	0.496
APZ42_000379	APZ42_022802	A0A164JQ10	A0A0P5D1S7	Alpha4GT1.	Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4.	0.518
APZ42_000379	APZ42_023462	A0A164JQ10	A0A0P5YWP8	Alpha4GT1.	Beta-1,4-galactosyltransferase.	0.595
APZ42_000379	APZ42_026505	A0A164JQ10	A0A162EDH1	Alpha4GT1.	Hexosyltransferase.	0.496
APZ42_000379	APZ42_027720	A0A164JQ10	A0A164R4S3	Alpha4GT1.	Uncharacterized protein.	0.516
APZ42_000379	APZ42_030161	A0A164JQ10	A0A164P0A8	Alpha4GT1.	Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4.	0.518
APZ42_000379	APZ42_034089	A0A164JQ10	A0A0N8AFV4	Alpha4GT1.	Beta-1,4-galactosyltransferase 6.	0.593
APZ42_000379	APZ42_034516	A0A164JQ10	A0A0P5VCF4	Alpha4GT1.	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase.	0.544
APZ42_000379	APZ42_034582	A0A164JQ10	A0A164K0H4	Alpha4GT1.	Beta4GalNAcTB.	0.519
APZ42_001627	APZ42_012004	A0A164IUY5	A0A0P5VJ43	Hexosyltransferase.	L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.	0.516
APZ42_001627	APZ42_017138	A0A164IUY5	A0A164ZNK7	Hexosyltransferase.	Beta-1,4-galactosyltransferase 6.	0.470
APZ42_001627	APZ42_022802	A0A164IUY5	A0A0P5D1S7	Hexosyltransferase.	Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4.	0.470
APZ42_001627	APZ42_023462	A0A164IUY5	A0A0P5YWP8	Hexosyltransferase.	Beta-1,4-galactosyltransferase.	0.470
APZ42_001627	APZ42_030161	A0A164IUY5	A0A164P0A8	Hexosyltransferase.	Putative Beta-1,4-N-acetylgalactosaminyltransferase BRE-4.	0.470
APZ42_001627	APZ42_034089	A0A164IUY5	A0A0N8AFV4	Hexosyltransferase.	Beta-1,4-galactosyltransferase 6.	0.470