(9 nodes) Butanoate metabolism network (Campylobacter hominis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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Your Input:
	ABS51628.1	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967. (226 aa)
	ABS51888.1	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812. (662 aa)
	ABS51984.1	Fumarate reductase iron-sulfur subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (243 aa)
	ABS50995.1	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855. (373 aa)
	ABS52343.1	OorB subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF02775. (281 aa)
	ilvB	Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118. (561 aa)
	ilvN	Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119. (156 aa)
	ABS50909.1	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. (477 aa)
	nifJ	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176. (1183 aa)

Your Current Organism:

Campylobacter hominis

NCBI taxonomy Id: 360107
Other names: C. hominis ATCC BAA-381, Campylobacter hominis ATCC BAA-381, Campylobacter hominis str. ATCC BAA-381, Campylobacter hominis strain ATCC BAA-381

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABS50909.1	ABS50995.1	CHAB381_1497	CHAB381_1140	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	0.830
ABS50909.1	ABS51628.1	CHAB381_1497	CHAB381_0856	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.	0.906
ABS50909.1	ABS51888.1	CHAB381_1497	CHAB381_0857	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.	0.935
ABS50909.1	ABS51984.1	CHAB381_1497	CHAB381_0858	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	Fumarate reductase iron-sulfur subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.911
ABS50909.1	ABS52343.1	CHAB381_1497	CHAB381_1141	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	OorB subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF02775.	0.808
ABS50909.1	nifJ	CHAB381_1497	CHAB381_1601	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.702
ABS50995.1	ABS50909.1	CHAB381_1140	CHAB381_1497	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	0.830
ABS50995.1	ABS51984.1	CHAB381_1140	CHAB381_0858	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	Fumarate reductase iron-sulfur subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.417
ABS50995.1	ABS52343.1	CHAB381_1140	CHAB381_1141	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	OorB subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF02775.	0.999
ABS50995.1	ilvB	CHAB381_1140	CHAB381_1165	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118.	0.913
ABS50995.1	ilvN	CHAB381_1140	CHAB381_1166	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119.	0.910
ABS50995.1	nifJ	CHAB381_1140	CHAB381_1601	OorA subunit of 2-oxoglutarate:acceptor oxidoreductase; Identified by match to protein family HMM PF01855.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.999
ABS51628.1	ABS50909.1	CHAB381_0856	CHAB381_1497	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	0.906
ABS51628.1	ABS51888.1	CHAB381_0856	CHAB381_0857	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.	0.999
ABS51628.1	ABS51984.1	CHAB381_0856	CHAB381_0858	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.	Fumarate reductase iron-sulfur subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.999
ABS51628.1	nifJ	CHAB381_0856	CHAB381_1601	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.996
ABS51888.1	ABS50909.1	CHAB381_0857	CHAB381_1497	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.	Succinate-semialdehyde dehydrogenase [NADP+] (ssdh); Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.	0.935
ABS51888.1	ABS51628.1	CHAB381_0857	CHAB381_0856	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.	Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.	0.999
ABS51888.1	ABS51984.1	CHAB381_0857	CHAB381_0858	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.	Fumarate reductase iron-sulfur subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.999
ABS51888.1	nifJ	CHAB381_0857	CHAB381_1601	Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.	Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.	0.998

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