40 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	ndhD	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic; Belongs to the complex I subunit 4 family. (500 aa)
	A0A2K1WY76	HP domain-containing protein. (960 aa)
	A0A2K1X2A9	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (622 aa)
	A0A2K1X394	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
	A0A2K1XP12	Uncharacterized protein. (860 aa)
	A0A2K1XS31	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...] (358 aa)
	A0A2K1XXM8	Uncharacterized protein. (860 aa)
	A0A2K1XZR1	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (871 aa)
	A0A2K1XZT8	Mitochondrial Rho GTPase. (651 aa)
	A0A2K1XZT9	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (861 aa)
	A0A2K1Y935	Uncharacterized protein. (632 aa)
	A0A2K1Y979	Uncharacterized protein. (632 aa)
	A0A2K1YPI9	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (926 aa)
	A0A2K1Z1H6	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (901 aa)
	A0A2K1ZF68	Uncharacterized protein. (670 aa)
	A0A2K1ZJ37	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (926 aa)
	A0A2K2A3E9	HP domain-containing protein. (960 aa)
	A0A2K2AB02	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (866 aa)
	A0A2K2AJX3	Mitochondrial Rho GTPase. (649 aa)
	A0A2K2BJ59	ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...] (354 aa)
	A0A2K2BQT8	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
	A0A3N7EVU9	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (863 aa)
	A0A3N7FEM8	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (881 aa)
	A0A3N7FQE4	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (903 aa)
	A0A3N7G994	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
	A4ZSZ4_POPTR	Actin. (377 aa)
	A9P828_POPTR	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
	A9P8T6_POPTR	Uncharacterized protein. (377 aa)
	A9PA83_POPTR	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	B9GMA4_POPTR	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (902 aa)
	B9GMA5_POPTR	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
	B9GVZ8_POPTR	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (925 aa)
	B9HI53_POPTR	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (481 aa)
	B9HY29_POPTR	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (481 aa)
	B9HY30_POPTR	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
	B9IFP7_POPTR	Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (688 aa)
	B9MZU9_POPTR	Mitochondrial Rho GTPase. (651 aa)
	U5GDL0_POPTR	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (866 aa)
	U5GTE9_POPTR	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (923 aa)
	U7DXS6_POPTR	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WY76	A0A2K1X2A9	A0A2K1WY76	A0A2K1X2A9	HP domain-containing protein.	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	0.491
A0A2K1WY76	A0A2K1XZT8	A0A2K1WY76	A0A2K1XZT8	HP domain-containing protein.	Mitochondrial Rho GTPase.	0.581
A0A2K1WY76	A0A2K2AJX3	A0A2K1WY76	A0A2K2AJX3	HP domain-containing protein.	Mitochondrial Rho GTPase.	0.581
A0A2K1WY76	A9P8T6_POPTR	A0A2K1WY76	A9P8T6	HP domain-containing protein.	Uncharacterized protein.	0.411
A0A2K1WY76	B9MZU9_POPTR	A0A2K1WY76	B9MZU9	HP domain-containing protein.	Mitochondrial Rho GTPase.	0.581
A0A2K1X2A9	A0A2K1WY76	A0A2K1X2A9	A0A2K1WY76	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	HP domain-containing protein.	0.491
A0A2K1X2A9	A0A2K1XZT8	A0A2K1X2A9	A0A2K1XZT8	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	Mitochondrial Rho GTPase.	0.493
A0A2K1X2A9	A0A2K2A3E9	A0A2K1X2A9	A0A2K2A3E9	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	HP domain-containing protein.	0.491
A0A2K1X2A9	A0A2K2AJX3	A0A2K1X2A9	A0A2K2AJX3	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	Mitochondrial Rho GTPase.	0.493
A0A2K1X2A9	B9MZU9_POPTR	A0A2K1X2A9	B9MZU9	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.	Mitochondrial Rho GTPase.	0.493
A0A2K1X394	A0A2K1XZR1	A0A2K1X394	A0A2K1XZR1	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.674
A0A2K1X394	A0A2K1XZT9	A0A2K1X394	A0A2K1XZT9	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.676
A0A2K1X394	A0A2K1Y935	A0A2K1X394	A0A2K1Y935	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein.	0.718
A0A2K1X394	A0A2K1Y979	A0A2K1X394	A0A2K1Y979	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein.	0.718
A0A2K1X394	A0A2K1ZF68	A0A2K1X394	A0A2K1ZF68	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein.	0.718
A0A2K1X394	A0A2K2AB02	A0A2K1X394	A0A2K2AB02	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.674
A0A2K1X394	A0A3N7EVU9	A0A2K1X394	A0A3N7EVU9	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.675
A0A2K1X394	A0A3N7FEM8	A0A2K1X394	A0A3N7FEM8	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.674
A0A2K1X394	A0A3N7FQE4	A0A2K1X394	A0A3N7FQE4	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.675
A0A2K1X394	U5GDL0_POPTR	A0A2K1X394	U5GDL0	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.674

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