STRINGSTRING
ndhD ndhD A0A2K1WY76 A0A2K1WY76 A0A2K1X2A9 A0A2K1X2A9 A0A2K1X394 A0A2K1X394 A0A2K1XP12 A0A2K1XP12 A0A2K1XS31 A0A2K1XS31 A0A2K1XXM8 A0A2K1XXM8 A0A2K1XZR1 A0A2K1XZR1 A0A2K1XZT8 A0A2K1XZT8 A0A2K1XZT9 A0A2K1XZT9 A0A2K1Y935 A0A2K1Y935 A0A2K1Y979 A0A2K1Y979 A0A2K1YPI9 A0A2K1YPI9 A0A2K1Z1H6 A0A2K1Z1H6 A0A2K1ZF68 A0A2K1ZF68 A0A2K1ZJ37 A0A2K1ZJ37 A0A2K2A3E9 A0A2K2A3E9 A0A2K2AB02 A0A2K2AB02 A0A2K2AJX3 A0A2K2AJX3 A0A2K2BJ59 A0A2K2BJ59 A0A2K2BQT8 A0A2K2BQT8 A0A3N7EVU9 A0A3N7EVU9 A0A3N7FEM8 A0A3N7FEM8 A0A3N7FQE4 A0A3N7FQE4 A0A3N7G994 A0A3N7G994 A4ZSZ4_POPTR A4ZSZ4_POPTR A9P828_POPTR A9P828_POPTR A9P8T6_POPTR A9P8T6_POPTR A9PA83_POPTR A9PA83_POPTR B9GMA4_POPTR B9GMA4_POPTR B9GMA5_POPTR B9GMA5_POPTR B9GVZ8_POPTR B9GVZ8_POPTR B9HI53_POPTR B9HI53_POPTR B9HY29_POPTR B9HY29_POPTR B9HY30_POPTR B9HY30_POPTR B9IFP7_POPTR B9IFP7_POPTR B9MZU9_POPTR B9MZU9_POPTR U5GDL0_POPTR U5GDL0_POPTR U5GTE9_POPTR U5GTE9_POPTR U7DXS6_POPTR U7DXS6_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ndhDNAD(P)H-quinone oxidoreductase chain 4, chloroplastic; Belongs to the complex I subunit 4 family. (500 aa)
A0A2K1WY76HP domain-containing protein. (960 aa)
A0A2K1X2A9Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (622 aa)
A0A2K1X394Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
A0A2K1XP12Uncharacterized protein. (860 aa)
A0A2K1XS31ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...] (358 aa)
A0A2K1XXM8Uncharacterized protein. (860 aa)
A0A2K1XZR1Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (871 aa)
A0A2K1XZT8Mitochondrial Rho GTPase. (651 aa)
A0A2K1XZT9Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (861 aa)
A0A2K1Y935Uncharacterized protein. (632 aa)
A0A2K1Y979Uncharacterized protein. (632 aa)
A0A2K1YPI9Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (926 aa)
A0A2K1Z1H6Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (901 aa)
A0A2K1ZF68Uncharacterized protein. (670 aa)
A0A2K1ZJ37Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (926 aa)
A0A2K2A3E9HP domain-containing protein. (960 aa)
A0A2K2AB02Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (866 aa)
A0A2K2AJX3Mitochondrial Rho GTPase. (649 aa)
A0A2K2BJ59ATPase; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subseq [...] (354 aa)
A0A2K2BQT8Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
A0A3N7EVU9Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (863 aa)
A0A3N7FEM8Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (881 aa)
A0A3N7FQE4Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (903 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
A4ZSZ4_POPTRActin. (377 aa)
A9P828_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
A9P8T6_POPTRUncharacterized protein. (377 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
B9GMA4_POPTRLipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (902 aa)
B9GMA5_POPTRLipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
B9GVZ8_POPTRLipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (925 aa)
B9HI53_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (481 aa)
B9HY29_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (481 aa)
B9HY30_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
B9IFP7_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (688 aa)
B9MZU9_POPTRMitochondrial Rho GTPase. (651 aa)
U5GDL0_POPTRLipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (866 aa)
U5GTE9_POPTRLipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (923 aa)
U7DXS6_POPTRLipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (898 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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