(23 nodes) Polysomal ribosome network (Arabidopsis thaliana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL13B	60S ribosomal protein L13-1. (206 aa)
	RPL8A	60S ribosomal protein L8-1. (258 aa)
	RPL32A	60S ribosomal protein L32-1; Belongs to the eukaryotic ribosomal protein eL32 family. (133 aa)
	RPL5B	60S ribosomal protein L5-2; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throug [...] (301 aa)
	RPL7AA	60S ribosomal protein L7a-1; Belongs to the eukaryotic ribosomal protein eL8 family. (257 aa)
	RPL17B	60S ribosomal protein L17-2. (175 aa)
	RPL31C	60S ribosomal protein L31-3. (119 aa)
	RPL10AC	60S ribosomal protein L10a-3. (217 aa)
	RPL7B	60S ribosomal protein L7-2. (242 aa)
	RPL8C	60S ribosomal protein L8-3; Belongs to the universal ribosomal protein uL2 family. (258 aa)
	RPP0B	60S acidic ribosomal protein P0-2; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (320 aa)
	RPL27B	60S ribosomal protein L27-2; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	RPL10AA	60S ribosomal protein L10a-1. (216 aa)
	RPL10A	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor. (220 aa)
	RPL26B	60S ribosomal protein L26-2; Belongs to the universal ribosomal protein uL24 family. (146 aa)
	RPL7AB	60S ribosomal protein L7a-2; Belongs to the eukaryotic ribosomal protein eL8 family. (256 aa)
	RPL23AB	60S ribosomal protein L23a-2; Binds to a specific region on the 26S rRNA; Belongs to the universal ribosomal protein uL23 family. (154 aa)
	RPL22B	60S ribosomal protein L22-2; Belongs to the eukaryotic ribosomal protein eL22 family. (124 aa)
	RPL4A	60S ribosomal protein L4-1. (406 aa)
	RPL31A	60S ribosomal protein L31-1; Belongs to the eukaryotic ribosomal protein eL31 family. (119 aa)
	RPL19A	60S ribosomal protein L19-1; Belongs to the eukaryotic ribosomal protein eL19 family. (214 aa)
	RPS20B	40S ribosomal protein S20-2; Belongs to the universal ribosomal protein uS10 family. (122 aa)
	RPL9D	60S ribosomal protein L9-2; Belongs to the universal ribosomal protein uL6 family. (194 aa)

Your Current Organism:

Arabidopsis thaliana

NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL10A	RPL10AA	Q93VT9	Q8VZB9	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L10a-1.	0.988
RPL10A	RPL10AC	Q93VT9	P59231	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L10a-3.	0.993
RPL10A	RPL13B	Q93VT9	P41127	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L13-1.	0.994
RPL10A	RPL17B	Q93VT9	P51413	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L17-2.	0.997
RPL10A	RPL19A	Q93VT9	Q9SRX2	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L19-1; Belongs to the eukaryotic ribosomal protein eL19 family.	0.986
RPL10A	RPL22B	Q93VT9	Q9M9W1	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L22-2; Belongs to the eukaryotic ribosomal protein eL22 family.	0.988
RPL10A	RPL23AB	Q93VT9	Q9M3C3	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L23a-2; Binds to a specific region on the 26S rRNA; Belongs to the universal ribosomal protein uL23 family.	0.998
RPL10A	RPL26B	Q93VT9	Q9FJX2	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L26-2; Belongs to the universal ribosomal protein uL24 family.	0.993
RPL10A	RPL27B	Q93VT9	Q8LCL3	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L27-2; Belongs to the eukaryotic ribosomal protein eL27 family.	0.990
RPL10A	RPL31A	Q93VT9	Q9SLL7	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L31-1; Belongs to the eukaryotic ribosomal protein eL31 family.	0.989
RPL10A	RPL31C	Q93VT9	P51420	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L31-3.	0.991
RPL10A	RPL32A	Q93VT9	P49211	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L32-1; Belongs to the eukaryotic ribosomal protein eL32 family.	0.995
RPL10A	RPL4A	Q93VT9	Q9SF40	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L4-1.	0.996
RPL10A	RPL5B	Q93VT9	P49227	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L5-2; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throug [...]	0.996
RPL10A	RPL7AA	Q93VT9	P49692	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L7a-1; Belongs to the eukaryotic ribosomal protein eL8 family.	0.996
RPL10A	RPL7AB	Q93VT9	Q9LZH9	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L7a-2; Belongs to the eukaryotic ribosomal protein eL8 family.	0.998
RPL10A	RPL7B	Q93VT9	P60040	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L7-2.	0.987
RPL10A	RPL8A	Q93VT9	P46286	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L8-1.	0.992
RPL10A	RPL8C	Q93VT9	Q42064	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L8-3; Belongs to the universal ribosomal protein uL2 family.	0.987
RPL10A	RPL9D	Q93VT9	Q9SZX9	60S ribosomal protein L10-1; Ribosomal protein involved in translational regulation. Contribute to general translation under UV-B stress. Involved in the NIK1-mediated defense response to geminivirus infection. Acts coordinately with LIMYB as a transcriptional repressor.	60S ribosomal protein L9-2; Belongs to the universal ribosomal protein uL6 family.	0.995