Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F4HTT8_ARATH | GAUT1 | F4HTT8 | Q9LE59 | Galacturonosyltransferase. | Polygalacturonate 4-alpha-galacturonosyltransferase; Involved in pectin biosynthesis. Catalyzes the transfer of galacturonic acid from uridine 5'-diphosphogalacturonic acid onto the pectic polysaccharide homogalacturonan. | 0.926 |
| F4HTT8_ARATH | GAUT4 | F4HTT8 | Q93ZX7 | Galacturonosyltransferase. | Probable galacturonosyltransferase 4; May be involved in pectin and/or xylans biosynthesis in cell walls; Belongs to the glycosyltransferase 8 family. | 0.785 |
| F4HTT8_ARATH | GAUT7 | F4HTT8 | Q9ZVI7 | Galacturonosyltransferase. | Probable galacturonosyltransferase 7; May be involved in pectin biosynthesis; Belongs to the glycosyltransferase 8 family. | 0.931 |
| F4HTT8_ARATH | PPME1 | F4HTT8 | Q84WM7 | Galacturonosyltransferase. | Pectinesterase PPME1; Acts in the modification of cell walls via demethylesterification of cell wall pectin. Involved in the pollen tube growth and determination of pollen tube morphology. Belongs to the pectinesterase family. | 0.473 |
| GAUT1 | F4HTT8_ARATH | Q9LE59 | F4HTT8 | Polygalacturonate 4-alpha-galacturonosyltransferase; Involved in pectin biosynthesis. Catalyzes the transfer of galacturonic acid from uridine 5'-diphosphogalacturonic acid onto the pectic polysaccharide homogalacturonan. | Galacturonosyltransferase. | 0.926 |
| GAUT1 | GAUT7 | Q9LE59 | Q9ZVI7 | Polygalacturonate 4-alpha-galacturonosyltransferase; Involved in pectin biosynthesis. Catalyzes the transfer of galacturonic acid from uridine 5'-diphosphogalacturonic acid onto the pectic polysaccharide homogalacturonan. | Probable galacturonosyltransferase 7; May be involved in pectin biosynthesis; Belongs to the glycosyltransferase 8 family. | 0.862 |
| GAUT4 | F4HTT8_ARATH | Q93ZX7 | F4HTT8 | Probable galacturonosyltransferase 4; May be involved in pectin and/or xylans biosynthesis in cell walls; Belongs to the glycosyltransferase 8 family. | Galacturonosyltransferase. | 0.785 |
| GAUT7 | F4HTT8_ARATH | Q9ZVI7 | F4HTT8 | Probable galacturonosyltransferase 7; May be involved in pectin biosynthesis; Belongs to the glycosyltransferase 8 family. | Galacturonosyltransferase. | 0.931 |
| GAUT7 | GAUT1 | Q9ZVI7 | Q9LE59 | Probable galacturonosyltransferase 7; May be involved in pectin biosynthesis; Belongs to the glycosyltransferase 8 family. | Polygalacturonate 4-alpha-galacturonosyltransferase; Involved in pectin biosynthesis. Catalyzes the transfer of galacturonic acid from uridine 5'-diphosphogalacturonic acid onto the pectic polysaccharide homogalacturonan. | 0.862 |
| GAUT7 | PME3 | Q9ZVI7 | O49006 | Probable galacturonosyltransferase 7; May be involved in pectin biosynthesis; Belongs to the glycosyltransferase 8 family. | Pectinesterase/pectinesterase inhibitor 3; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family. | 0.410 |
| LUH | MYB52 | O48847 | Q6R0C4 | Transcriptional corepressor LEUNIG_HOMOLOG; Transcription repressor subunit of the SEU-SLK1 and SEU-SLK2 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes, by means of an epigenetic process involving histone modification (e.g. H3K9 and H3K14 acetylation), probably by recruiting HDAC, to facilitate the condensation of chromatin thus preventing transcription at the target genes. Can also act as a transcription activator. Implicated in embryo and floral development. Involved in post- synthesis cell wall modifications necessary for mucilage extrusi [...] | Transcription factor MYB52; Transcription factor that confers sensitivity to abscisic acid (ABA) and salt, but tolerance to drought. Regulates secondary cell wall (SCW) biosynthesis, especially in interfascicular and xylary fibers. | 0.540 |
| LUH | PME58 | O48847 | Q9FJ21 | Transcriptional corepressor LEUNIG_HOMOLOG; Transcription repressor subunit of the SEU-SLK1 and SEU-SLK2 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes, by means of an epigenetic process involving histone modification (e.g. H3K9 and H3K14 acetylation), probably by recruiting HDAC, to facilitate the condensation of chromatin thus preventing transcription at the target genes. Can also act as a transcription activator. Implicated in embryo and floral development. Involved in post- synthesis cell wall modifications necessary for mucilage extrusi [...] | Probable pectinesterase/pectinesterase inhibitor 58; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family. | 0.475 |
| LUH | PMEI6 | O48847 | O22244 | Transcriptional corepressor LEUNIG_HOMOLOG; Transcription repressor subunit of the SEU-SLK1 and SEU-SLK2 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes, by means of an epigenetic process involving histone modification (e.g. H3K9 and H3K14 acetylation), probably by recruiting HDAC, to facilitate the condensation of chromatin thus preventing transcription at the target genes. Can also act as a transcription activator. Implicated in embryo and floral development. Involved in post- synthesis cell wall modifications necessary for mucilage extrusi [...] | Pectinesterase inhibitor 6; Pectin methylesterase (PME) inhibitor that targets PME from seeds and modulates PME activity and pectin methylesterification during seed germination. Promotes mucilage release by limiting methylesterification of homogalacturonan in seed coat epidermal cells. Belongs to the PMEI family. | 0.802 |
| LUH | SBT1.7 | O48847 | O65351 | Transcriptional corepressor LEUNIG_HOMOLOG; Transcription repressor subunit of the SEU-SLK1 and SEU-SLK2 transcriptional corepressor of abiotic stress (e.g. salt and osmotic stress) response genes, by means of an epigenetic process involving histone modification (e.g. H3K9 and H3K14 acetylation), probably by recruiting HDAC, to facilitate the condensation of chromatin thus preventing transcription at the target genes. Can also act as a transcription activator. Implicated in embryo and floral development. Involved in post- synthesis cell wall modifications necessary for mucilage extrusi [...] | Subtilisin-like protease SBT1.7; Serine protease. Has a substrate preference for the hydrophobic residues Phe and Ala and the basic residue Asp in the P1 position, and for Asp, Leu or Ala in the P1' position. Essential for mucilage release from seed coats. Triggers the accumulation and/or activation of cell wall modifying enzymes necessary either for the loosening of the outer primary cell wall, or to facilitate swelling of the mucilage. | 0.785 |
| MMI9.1 | PME41 | Q9LVA3 | Q8RXK7 | Ripening-related protein-like; contains similarity to pectinesterase. | Probable pectinesterase/pectinesterase inhibitor 41; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family. | 0.541 |
| MMI9.1 | PMEI1 | Q9LVA3 | Q9LNF2 | Ripening-related protein-like; contains similarity to pectinesterase. | Pectinesterase inhibitor 1; Inhibits pectin methylesterase (PME) from flowers and siliques. Inhibits PME from leaves. | 0.770 |
| MMI9.1 | PMEI12 | Q9LVA3 | Q9FJR5 | Ripening-related protein-like; contains similarity to pectinesterase. | Pectinesterase inhibitor 12; Pectin methylesterase (PME) inhibitor involved in the maintenance of cell wall integrity in response to necrotrophic pathogens. Modulates PME activity and pectin methylesterification during infection by Botrytis cinerea and contributes to resistance against the pathogen; Belongs to the PMEI family. | 0.808 |
| MMI9.1 | PMEI2 | Q9LVA3 | Q9LUV1 | Ripening-related protein-like; contains similarity to pectinesterase. | Pectinesterase inhibitor 2; Inhibits pectin methylesterase (PME) from flowers, siliques and pollen tube. | 0.774 |
| MMI9.1 | PMEI5 | Q9LVA3 | Q9SIC6 | Ripening-related protein-like; contains similarity to pectinesterase. | Pectinesterase inhibitor 5; Pectin methylesterase (PME) inhibitor that targets PME from seeds and modulates PME activity and pectin methylesterification during seed germination. | 0.680 |
| MMI9.1 | T16B5.9 | Q9LVA3 | Q9SAC5 | Ripening-related protein-like; contains similarity to pectinesterase. | Plant invertase/pectin methylesterase inhibitor superfamily protein. | 0.470 |
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