(64 nodes) Mixed, incl. Starch and sucrose metabolism, and ABC-type transporter activity network (Stigmatella aurantiaca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADO68174.1	Extracellular solute-binding family protein. (442 aa)
	ADO68175.1	Binding-protein-dependent transport systems inner membrane component. (293 aa)
	ADO68417.1	Glycosyl transferase, group 1. (395 aa)
	ADO68874.1	Conserved uncharacterized protein. (467 aa)
	thiL	Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. (316 aa)
	ADO69097.1	Alpha-amylase. (561 aa)
	ADO69112.1	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (370 aa)
	ADO69113.1	Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (354 aa)
	ADO69114.1	Sugar ABC transporter, permease protein. (290 aa)
	ADO69115.1	ABC sugar (Glycerol) transporter, inner membrane subunit. (265 aa)
	ADO69116.1	Conserved uncharacterized protein. (92 aa)
	ADO69117.1	ABC-type sugar transport system, periplasmic component. (586 aa)
	malQ	4-alpha-glucanotransferase. (507 aa)
	gacK	Acarbose-7-kinase GacK. (306 aa)
	gacR	1-epi-valienol-1, 7-bisphosphate-1-adenylyltransferase GacR. (360 aa)
	gacS	Glycosyltransferase GacS. (657 aa)
	gacU	Kinase (1-epi-valienol-7-phosphate-1-kinase) GacU. (512 aa)
	gacV	dTDP-4-keto-6-deoxy-glucose 4-aminotransferase GacV; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (430 aa)
	gacJ	GacJ protein. (121 aa)
	ADO69184.1	Uncharacterized protein. (226 aa)
	ADO69185.1	ABC transporter, ATP-binding protein. (544 aa)
	ADO69186.1	RTX toxin transporter. (555 aa)
	ADO69187.1	Conserved uncharacterized protein. (367 aa)
	otsAB	Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase. (723 aa)
	ADO69670.1	Beta-phosphoglucomutase hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (525 aa)
	ADO69671.1	Trehalose 6-phosphate phosphorylase. (818 aa)
	glgA	Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (475 aa)
	malK	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (360 aa)
	mtlG	Mannitol ABC transporter, permease protein. (277 aa)
	glgC	Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (409 aa)
	treY	Maltooligosyltrehalose synthase. (1010 aa)
	glgX	Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (716 aa)
	amy13I	Alpha-amylase. (421 aa)
	ADO70725.1	Malto-oligosyltrehalose trehalohydrolase-like protein. (1038 aa)
	ADO70933.1	1-epi-valienol-1, 7-bisphosphate-1-adenylyltransferase GacR. (363 aa)
	ADO71329.1	Maltose binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family. (414 aa)
	ADO71444.1	Malto-oligosyltrehalose trehalohydrolase. (619 aa)
	glgB	1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (733 aa)
	ADO71951.1	Sugar phosphotransferase. (443 aa)
	treS	Trehalose synthase. (551 aa)
	glgE	Conserved uncharacterized protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. (665 aa)
	ADO72121.1	Extracellular solute-binding protein, family 1. (421 aa)
	ADO72122.1	Binding-protein-dependent transport protein, inner membrane component. (321 aa)
	ADO72123.1	Binding-protein-dependent transport systems inner membrane component. (274 aa)
	glgC-2	Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (414 aa)
	ADO72888.1	Glycosyl hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family. (529 aa)
	ADO73562.1	Conserved uncharacterized protein. (422 aa)
	ADO73843.1	Glycoside hydrolase, family 13; Belongs to the glycosyl hydrolase 13 family. (800 aa)
	glgP	Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (846 aa)
	rsgA	Ribosome-associated GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (361 aa)
	ADO74891.1	Alpha-1,6-glucosidase; Belongs to the glycosyl hydrolase 13 family. (1130 aa)
	ADO74892.1	Uncharacterized protein. (103 aa)
	ADO74893.1	Alpha amylase catalytic region. (494 aa)
	ADO74894.1	ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (364 aa)
	ADO74895.1	Maltotriose-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family. (407 aa)
	malF	Maltose transport system permease protein MalF. (681 aa)
	ADO74897.1	ABC-type Maltose/ Maltodextrin permease. (292 aa)
	ADO74898.1	Glucodextranase. (271 aa)
	ADO74984.1	4-alpha-glucanotransferase. (516 aa)
	ADO75520.1	Glycosyl hydrolase. (658 aa)
	treZ	Malto-oligosyltrehalose trehalohydrolase. (616 aa)
	ADO75597.1	4-alpha-glucanotransferase. (651 aa)
	ADO75755.1	Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (711 aa)
	ADO75952.1	Trehalase. (645 aa)

Your Current Organism:

Stigmatella aurantiaca

NCBI taxonomy Id: 378806
Other names: S. aurantiaca DW4/3-1, Stigmatella aurantiaca DW4/3-1, Stigmatella aurantiaca str. DW4/3-1, Stigmatella aurantiaca strain DW4/3-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADO68174.1	ADO68175.1	STAUR_0365	STAUR_0366	Extracellular solute-binding family protein.	Binding-protein-dependent transport systems inner membrane component.	0.996
ADO68174.1	ADO69112.1	STAUR_0365	STAUR_1308	Extracellular solute-binding family protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.658
ADO68174.1	ADO69113.1	STAUR_0365	STAUR_1309	Extracellular solute-binding family protein.	Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.658
ADO68174.1	ADO69114.1	STAUR_0365	STAUR_1310	Extracellular solute-binding family protein.	Sugar ABC transporter, permease protein.	0.669
ADO68174.1	ADO69115.1	STAUR_0365	STAUR_1311	Extracellular solute-binding family protein.	ABC sugar (Glycerol) transporter, inner membrane subunit.	0.723
ADO68174.1	ADO72122.1	STAUR_0365	STAUR_4342	Extracellular solute-binding family protein.	Binding-protein-dependent transport protein, inner membrane component.	0.801
ADO68174.1	ADO72123.1	STAUR_0365	STAUR_4343	Extracellular solute-binding family protein.	Binding-protein-dependent transport systems inner membrane component.	0.814
ADO68174.1	ADO74894.1	STAUR_0365	STAUR_7138	Extracellular solute-binding family protein.	ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.	0.937
ADO68174.1	malF	STAUR_0365	STAUR_7140	Extracellular solute-binding family protein.	Maltose transport system permease protein MalF.	0.733
ADO68174.1	malK	STAUR_0365	STAUR_2059	Extracellular solute-binding family protein.	Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.	0.948
ADO68174.1	mtlG	STAUR_0365	STAUR_2060	Extracellular solute-binding family protein.	Mannitol ABC transporter, permease protein.	0.985
ADO68175.1	ADO68174.1	STAUR_0366	STAUR_0365	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding family protein.	0.996
ADO68175.1	ADO68874.1	STAUR_0366	STAUR_1070	Binding-protein-dependent transport systems inner membrane component.	Conserved uncharacterized protein.	0.661
ADO68175.1	ADO69097.1	STAUR_0366	STAUR_1293	Binding-protein-dependent transport systems inner membrane component.	Alpha-amylase.	0.404
ADO68175.1	ADO69112.1	STAUR_0366	STAUR_1308	Binding-protein-dependent transport systems inner membrane component.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.797
ADO68175.1	ADO69113.1	STAUR_0366	STAUR_1309	Binding-protein-dependent transport systems inner membrane component.	Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.819
ADO68175.1	ADO69115.1	STAUR_0366	STAUR_1311	Binding-protein-dependent transport systems inner membrane component.	ABC sugar (Glycerol) transporter, inner membrane subunit.	0.855
ADO68175.1	ADO69117.1	STAUR_0366	STAUR_1313	Binding-protein-dependent transport systems inner membrane component.	ABC-type sugar transport system, periplasmic component.	0.669
ADO68175.1	ADO71329.1	STAUR_0366	STAUR_3539	Binding-protein-dependent transport systems inner membrane component.	Maltose binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.	0.884
ADO68175.1	ADO72121.1	STAUR_0366	STAUR_4341	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1.	0.865

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