(6 nodes) Prp19 complex, and Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer network (Aspergillus niger)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3XLH4_ASPNA	SKIP_SNW domain-containing protein. (584 aa)
	G3XNU7_ASPNA	RRM domain-containing protein. (350 aa)
	G3XYP1_ASPNA	Uncharacterized protein. (251 aa)
	G3Y4U0_ASPNA	Uncharacterized protein. (148 aa)
	G3YDQ1_ASPNA	TPR_REGION domain-containing protein. (850 aa)
	G3YG24_ASPNA	Uncharacterized protein. (677 aa)

Your Current Organism:

Aspergillus niger

NCBI taxonomy Id: 380704
Other names: A. niger ATCC 1015, Aspergillus niger ATCC 1015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3XLH4_ASPNA	G3XNU7_ASPNA	G3XLH4	G3XNU7	SKIP_SNW domain-containing protein.	RRM domain-containing protein.	0.997
G3XLH4_ASPNA	G3XYP1_ASPNA	G3XLH4	G3XYP1	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.993
G3XLH4_ASPNA	G3Y4U0_ASPNA	G3XLH4	G3Y4U0	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.997
G3XLH4_ASPNA	G3YDQ1_ASPNA	G3XLH4	G3YDQ1	SKIP_SNW domain-containing protein.	TPR_REGION domain-containing protein.	0.998
G3XLH4_ASPNA	G3YG24_ASPNA	G3XLH4	G3YG24	SKIP_SNW domain-containing protein.	Uncharacterized protein.	0.998
G3XNU7_ASPNA	G3XLH4_ASPNA	G3XNU7	G3XLH4	RRM domain-containing protein.	SKIP_SNW domain-containing protein.	0.997
G3XNU7_ASPNA	G3XYP1_ASPNA	G3XNU7	G3XYP1	RRM domain-containing protein.	Uncharacterized protein.	0.995
G3XNU7_ASPNA	G3Y4U0_ASPNA	G3XNU7	G3Y4U0	RRM domain-containing protein.	Uncharacterized protein.	0.997
G3XNU7_ASPNA	G3YDQ1_ASPNA	G3XNU7	G3YDQ1	RRM domain-containing protein.	TPR_REGION domain-containing protein.	0.997
G3XNU7_ASPNA	G3YG24_ASPNA	G3XNU7	G3YG24	RRM domain-containing protein.	Uncharacterized protein.	0.997
G3XYP1_ASPNA	G3XLH4_ASPNA	G3XYP1	G3XLH4	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.993
G3XYP1_ASPNA	G3XNU7_ASPNA	G3XYP1	G3XNU7	Uncharacterized protein.	RRM domain-containing protein.	0.995
G3XYP1_ASPNA	G3Y4U0_ASPNA	G3XYP1	G3Y4U0	Uncharacterized protein.	Uncharacterized protein.	0.998
G3XYP1_ASPNA	G3YDQ1_ASPNA	G3XYP1	G3YDQ1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.997
G3XYP1_ASPNA	G3YG24_ASPNA	G3XYP1	G3YG24	Uncharacterized protein.	Uncharacterized protein.	0.997
G3Y4U0_ASPNA	G3XLH4_ASPNA	G3Y4U0	G3XLH4	Uncharacterized protein.	SKIP_SNW domain-containing protein.	0.997
G3Y4U0_ASPNA	G3XNU7_ASPNA	G3Y4U0	G3XNU7	Uncharacterized protein.	RRM domain-containing protein.	0.997
G3Y4U0_ASPNA	G3XYP1_ASPNA	G3Y4U0	G3XYP1	Uncharacterized protein.	Uncharacterized protein.	0.998
G3Y4U0_ASPNA	G3YDQ1_ASPNA	G3Y4U0	G3YDQ1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.997
G3Y4U0_ASPNA	G3YG24_ASPNA	G3Y4U0	G3YG24	Uncharacterized protein.	Uncharacterized protein.	0.997