(25 nodes) Mediator complex network (Glycine max)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0EU45	Uncharacterized protein. (460 aa)
	A0A0R0FJM9	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (257 aa)
	A0A0R0FX46	Uncharacterized protein. (853 aa)
	A0A0R0GE56	Uncharacterized protein. (520 aa)
	A0A0R0HVT6	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1951 aa)
	A0A0R0J100	Med12 domain-containing protein. (2222 aa)
	A0A0R0L2F2	Uncharacterized protein. (308 aa)
	A0A368UIL6	Uncharacterized protein. (331 aa)
	C6SYN4_SOYBN	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (115 aa)
	I1JP91_SOYBN	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (115 aa)
	I1JQ84_SOYBN	Uncharacterized protein. (425 aa)
	I1K4T1_SOYBN	Uncharacterized protein. (141 aa)
	I1KC19_SOYBN	Uncharacterized protein. (168 aa)
	I1KTC3_SOYBN	Uncharacterized protein. (141 aa)
	I1KUT8_SOYBN	Uncharacterized protein. (178 aa)
	I1LY46_SOYBN	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (218 aa)
	I1M616_SOYBN	Uncharacterized protein. (532 aa)
	I1MUC0_SOYBN	Uncharacterized protein. (660 aa)
	K7K0Q7_SOYBN	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1951 aa)
	K7KL68_SOYBN	Uncharacterized protein. (174 aa)
	K7KNJ6_SOYBN	Uncharacterized protein. (659 aa)
	K7KYY0_SOYBN	Uncharacterized protein. (195 aa)
	K7LF92_SOYBN	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (695 aa)
	K7LG47_SOYBN	Med12 domain-containing protein. (2259 aa)
	K7MM40_SOYBN	Uncharacterized protein. (246 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0EU45	A0A0R0FJM9	A0A0R0EU45	A0A0R0FJM9	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.635
A0A0R0EU45	A0A0R0FX46	A0A0R0EU45	A0A0R0FX46	Uncharacterized protein.	Uncharacterized protein.	0.674
A0A0R0EU45	A0A0R0GE56	A0A0R0EU45	A0A0R0GE56	Uncharacterized protein.	Uncharacterized protein.	0.716
A0A0R0EU45	A0A0R0HVT6	A0A0R0EU45	A0A0R0HVT6	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.710
A0A0R0EU45	A0A0R0J100	A0A0R0EU45	A0A0R0J100	Uncharacterized protein.	Med12 domain-containing protein.	0.543
A0A0R0EU45	A0A0R0L2F2	A0A0R0EU45	A0A0R0L2F2	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0R0EU45	A0A368UIL6	A0A0R0EU45	A0A368UIL6	Uncharacterized protein.	Uncharacterized protein.	0.667
A0A0R0EU45	C6SYN4_SOYBN	A0A0R0EU45	C6SYN4	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.737
A0A0R0EU45	I1JP91_SOYBN	A0A0R0EU45	I1JP91	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.737
A0A0R0EU45	I1JQ84_SOYBN	A0A0R0EU45	I1JQ84	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A0R0EU45	I1K4T1_SOYBN	A0A0R0EU45	I1K4T1	Uncharacterized protein.	Uncharacterized protein.	0.683
A0A0R0EU45	I1KC19_SOYBN	A0A0R0EU45	I1KC19	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A0R0EU45	I1KTC3_SOYBN	A0A0R0EU45	I1KTC3	Uncharacterized protein.	Uncharacterized protein.	0.683
A0A0R0EU45	I1KUT8_SOYBN	A0A0R0EU45	I1KUT8	Uncharacterized protein.	Uncharacterized protein.	0.744
A0A0R0EU45	I1LY46_SOYBN	A0A0R0EU45	I1LY46	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.635
A0A0R0EU45	I1M616_SOYBN	A0A0R0EU45	I1M616	Uncharacterized protein.	Uncharacterized protein.	0.727
A0A0R0EU45	I1MUC0_SOYBN	A0A0R0EU45	I1MUC0	Uncharacterized protein.	Uncharacterized protein.	0.716
A0A0R0EU45	K7K0Q7_SOYBN	A0A0R0EU45	K7K0Q7	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.710
A0A0R0EU45	K7KL68_SOYBN	A0A0R0EU45	K7KL68	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A0R0EU45	K7KNJ6_SOYBN	A0A0R0EU45	K7KNJ6	Uncharacterized protein.	Uncharacterized protein.	0.716