STRINGSTRING
Sare_0024 Sare_0024 Sare_0025 Sare_0025 Sare_0318 Sare_0318 Sare_1785 Sare_1785 Sare_2039 Sare_2039 Sare_2122 Sare_2122 Sare_2181 Sare_2181 Sare_2183 Sare_2183 Sare_2185 Sare_2185 Sare_2186 Sare_2186 Sare_2187 Sare_2187 Sare_2188 Sare_2188 Sare_2189 Sare_2189 Sare_2196 Sare_2196 Sare_2200 Sare_2200 Sare_3298 Sare_3298 Sare_3299 Sare_3299 Sare_3300 Sare_3300 Sare_3301 Sare_3301 Sare_3302 Sare_3302 Sare_3303 Sare_3303 Sare_3304 Sare_3304 Sare_3305 Sare_3305 Sare_3306 Sare_3306 Sare_3307 Sare_3307 Sare_3309 Sare_3309 Sare_3310 Sare_3310 Sare_3311 Sare_3311
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sare_0024PFAM: DSBA oxidoreductase; KEGG: stp:Strop_0020 DsbA oxidoreductase. (211 aa)
Sare_0025PFAM: Fe-S metabolism associated SufE; KEGG: stp:Strop_0021 Fe-S metabolism associated SufE. (139 aa)
Sare_0318Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: stp:Strop_0275 aminotransferase, class V. (414 aa)
Sare_1785PFAM: aminotransferase class V; KEGG: stp:Strop_1799 aminotransferase, class V. (347 aa)
Sare_2039PFAM: aminotransferase class V; KEGG: aav:Aave_1124 aminotransferase, class V. (460 aa)
Sare_2122Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (435 aa)
Sare_2181Cystathionine gamma-synthase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ade:Adeh_3707 cystathionine gamma-synthase. (378 aa)
Sare_2183PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: sen:SACE_0962 CalU12. (230 aa)
Sare_2185Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bra:BRADO4190 putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. (291 aa)
Sare_2186Hypothetical protein. (272 aa)
Sare_2187PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ade:Adeh_0846 cysteine desulfurase, SufS subfamily. (422 aa)
Sare_2188PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sco:SCO1816 hypothetical protein. (507 aa)
Sare_2189KEGG: ace:Acel_1148 hypothetical protein. (459 aa)
Sare_2196KEGG: mxa:MXAN_4412 hypothetical protein. (297 aa)
Sare_2200PFAM: homocysteine S-methyltransferase; KEGG: hha:Hhal_0392 homocysteine S-methyltransferase. (307 aa)
Sare_3298PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3071 ABC transporter related. (658 aa)
Sare_3299PFAM: Enoyl-CoA hydratase/isomerase; KEGG: stp:Strop_3072 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
Sare_3300KEGG: stp:Strop_3073 hypothetical protein. (75 aa)
Sare_3301PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3074 ABC transporter related. (534 aa)
Sare_3302KEGG: stp:Strop_2749 hypothetical protein. (230 aa)
Sare_3303PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: stp:Strop_3076 lysine exporter protein (LysE/YggA). (237 aa)
Sare_3304PFAM: protein of unknown function DUF59; KEGG: stp:Strop_3077 protein of unknown function DUF59. (140 aa)
Sare_3305TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: stp:Strop_3078 SUF system FeS assembly protein, NifU family. (158 aa)
Sare_3306TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: stp:Strop_3079 cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (434 aa)
Sare_3307KEGG: stp:Strop_3080 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)
Sare_3309TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: stp:Strop_3082 FeS assembly protein SufD. (398 aa)
Sare_3310TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: stp:Strop_3083 FeS assembly protein SufB. (476 aa)
Sare_3311Putative transcriptional regulator; PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: stp:Strop_3084 regulatory protein, ArsR. (251 aa)
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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