STRINGSTRING
atpB atpB atpE atpE atpE-2 atpE-2 atpF atpF atpH atpH atpA atpA atpG atpG atpD atpD atpC atpC SDJ92727.1 SDJ92727.1 SDJ92768.1 SDJ92768.1 SDJ96329.1 SDJ96329.1 SDJ96372.1 SDJ96372.1 SDJ96416.1 SDJ96416.1 SDJ96459.1 SDJ96459.1 SDK13922.1 SDK13922.1 SDK20691.1 SDK20691.1 SDK39165.1 SDK39165.1 rbfA rbfA SDK47360.1 SDK47360.1 SDK76882.1 SDK76882.1 SDK82804.1 SDK82804.1 SDK85297.1 SDK85297.1 SDK91477.1 SDK91477.1 SDK91518.1 SDK91518.1 SDK93089.1 SDK93089.1 SDK95730.1 SDK95730.1 SDK95759.1 SDK95759.1 SDK95789.1 SDK95789.1 SDK95823.1 SDK95823.1 SDK98691.1 SDK98691.1 SDL11710.1 SDL11710.1 SDL33853.1 SDL33853.1 SDL34041.1 SDL34041.1 SDL34086.1 SDL34086.1 SDL34315.1 SDL34315.1 SDL34352.1 SDL34352.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atpBATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (233 aa)
atpEATP synthase, F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (184 aa)
atpE-2ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (88 aa)
atpFATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (168 aa)
atpHATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (180 aa)
atpAATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (503 aa)
atpGATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (290 aa)
atpDATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (465 aa)
atpCATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (136 aa)
SDJ92727.1Predicted permease. (158 aa)
SDJ92768.1Predicted permease. (180 aa)
SDJ96329.1NADP-reducing hydrogenase subunit HndA. (169 aa)
SDJ96372.1NAD(P)-dependent iron-only hydrogenase iron-sulfur protein. (129 aa)
SDJ96416.1NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein. (549 aa)
SDJ96459.1NAD(P)-dependent iron-only hydrogenase catalytic subunit. (581 aa)
SDK13922.1Hypothetical protein. (327 aa)
SDK20691.1Iron only hydrogenase large subunit, C-terminal domain. (425 aa)
SDK39165.1Fumarate reductase flavoprotein subunit. (597 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (128 aa)
SDK47360.1Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. (407 aa)
SDK76882.1Iron only hydrogenase large subunit, C-terminal domain. (573 aa)
SDK82804.1Glycine/D-amino acid oxidase. (503 aa)
SDK85297.1Manganese-dependent inorganic pyrophosphatase. (537 aa)
SDK91477.1Hypothetical protein. (161 aa)
SDK91518.1Predicted permease. (177 aa)
SDK93089.1Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (482 aa)
SDK95730.1Multisubunit sodium/proton antiporter, MrpC subunit. (126 aa)
SDK95759.1Multisubunit sodium/proton antiporter, MrpD subunit. (494 aa)
SDK95789.1Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit. (676 aa)
SDK95823.1Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit. (610 aa)
SDK98691.1Predicted permease. (160 aa)
SDL11710.14Fe-4S dicluster domain-containing protein. (348 aa)
SDL33853.1Hypothetical protein. (47 aa)
SDL34041.1NAD(P)-dependent iron-only hydrogenase catalytic subunit. (595 aa)
SDL34086.14Fe-4S dicluster domain-containing protein. (218 aa)
SDL34315.1NAD(P)-dependent iron-only hydrogenase iron-sulfur protein. (122 aa)
SDL34352.1NADH-quinone oxidoreductase subunit E. (141 aa)
Your Current Organism:
Natronincola ferrireducens
NCBI taxonomy Id: 393762
Other names: DSM 18346, N. ferrireducens, Natronincola ferrireducens Zhilina et al. 2009, VKM B-2402, strain Z-0511
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