STRINGSTRING
Ccel_2746 Ccel_2746 Ccel_2747 Ccel_2747 Ccel_2748 Ccel_2748 Ccel_2749 Ccel_2749 Ccel_2752 Ccel_2752 Ccel_2753 Ccel_2753 Ccel_2755 Ccel_2755 Ccel_2764 Ccel_2764
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ccel_2746KEGG: ckl:CKL_3870 hypothetical protein. (137 aa)
Ccel_2747KEGG: hmo:HM1_0617 hypothetical protein. (83 aa)
Ccel_2748KEGG: hmo:HM1_0614 hypothetical protein. (120 aa)
Ccel_2749PFAM: NLP/P60 protein; KEGG: dsy:DSY0034 hypothetical protein. (378 aa)
Ccel_2752KEGG: dsy:DSY4546 hypothetical protein. (342 aa)
Ccel_2753KEGG: hmo:HM1_0605 hypothetical protein. (610 aa)
Ccel_2755KEGG: hmo:HM1_0601 hypothetical protein. (86 aa)
Ccel_2764KEGG: hmo:HM1_0599 hypothetical protein. (286 aa)
Your Current Organism:
Ruminiclostridium cellulolyticum
NCBI taxonomy Id: 394503
Other names: Clostridium cellulolyticum H10, R. cellulolyticum H10, Ruminiclostridium cellulolyticum H10
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