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BF93_06775 BF93_06775 ilvA ilvA BF93_18140 BF93_18140 BF93_17920 BF93_17920 BF93_17320 BF93_17320 BF93_16615 BF93_16615 BF93_16020 BF93_16020 BF93_16015 BF93_16015 BF93_15635 BF93_15635 BF93_14885 BF93_14885 BF93_13905 BF93_13905 gpmA gpmA BF93_13500 BF93_13500 asd asd BF93_13310 BF93_13310 BF93_13125 BF93_13125 BF93_12380 BF93_12380 BF93_11860 BF93_11860 BF93_11200 BF93_11200 BF93_10690 BF93_10690 BF93_10490 BF93_10490 BF93_10095 BF93_10095 BF93_09825 BF93_09825 BF93_09815 BF93_09815 BF93_09670 BF93_09670 BF93_09360 BF93_09360 BF93_09050 BF93_09050 gcvT gcvT gcvH gcvH gcvP gcvP trpA trpA BF93_06500 BF93_06500 BF93_05750 BF93_05750 BF93_05105 BF93_05105 BF93_04055 BF93_04055 BF93_03615 BF93_03615 BF93_03185 BF93_03185 serC serC BF93_02240 BF93_02240 tdh tdh kbl kbl BF93_01760 BF93_01760 glyA glyA BF93_01150 BF93_01150 BF93_00450 BF93_00450 BF93_00360 BF93_00360 thrB thrB BF93_00060 BF93_00060 BF93_00055 BF93_00055
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BF93_06775Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (422 aa)
BF93_18140Catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
BF93_179202-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
BF93_17320phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
BF93_16615Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
BF93_16020Choline oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
BF93_16015Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (498 aa)
BF93_15635phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
BF93_14885Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (409 aa)
BF93_13905Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (639 aa)
gpmAPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (247 aa)
BF93_13500Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (380 aa)
BF93_13310Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (455 aa)
BF93_13125phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
BF93_12380Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
BF93_118602-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
BF93_11200Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
BF93_106902-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (350 aa)
BF93_10490Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
BF93_100952-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (339 aa)
BF93_09825Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (837 aa)
BF93_09815Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (398 aa)
BF93_09670Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (222 aa)
BF93_09360Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (228 aa)
BF93_09050Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
gcvTGlycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. (375 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (123 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (997 aa)
trpATryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (268 aa)
BF93_06500Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
BF93_05750Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (215 aa)
BF93_051052-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
BF93_04055Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
BF93_036152-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (324 aa)
BF93_03185Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. (464 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (376 aa)
BF93_02240Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family. (524 aa)
tdhL-threonine 3-dehydrogenase; Converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
kbl2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (406 aa)
BF93_01760Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family. (376 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (422 aa)
BF93_01150Primary-amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
BF93_004503-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (534 aa)
BF93_00360Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
thrBSerine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (305 aa)
BF93_00060Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (352 aa)
BF93_00055Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
Your Current Organism:
Brachybacterium phenoliresistens
NCBI taxonomy Id: 396014
Other names: B. phenoliresistens, BCRC 17589, Brachybacterium phenoliresistens Chou et al. 2007, Brachybacterium sp. phenol-A, JCM 15157, LMG 23707, LMG:23707, strain phenol-A
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