16 items (Oryza sativa Indica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OsI_30168	PCI domain-containing protein. (339 aa)
	OsI_25803	PCI domain-containing protein. (267 aa)
	OsI_21232	RPN13_C domain-containing protein. (306 aa)
	OsI_10521	PCI domain-containing protein. (385 aa)
	OsI_14352	PCI domain-containing protein. (443 aa)
	OsI_12343	PCI domain-containing protein. (425 aa)
	OsI_01614	Uncharacterized protein. (90 aa)
	OsI_32229	PCI domain-containing protein. (487 aa)
	OsI_24376	MPN domain-containing protein. (316 aa)
	OsI_19702	MPN domain-containing protein. (307 aa)
	OsI_16043	PCI domain-containing protein. (310 aa)
	OsI_02152	PCI domain-containing protein. (385 aa)
	OsI_01353	Uncharacterized protein. (76 aa)
	OsI_01313	MPN domain-containing protein. (307 aa)
	OsI_01311	Uncharacterized protein. (104 aa)
	OsI_24762	MPN domain-containing protein. (307 aa)

Your Current Organism:

Oryza sativa Indica

NCBI taxonomy Id: 39946
Other names: Indian rice, Indica rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Indica Group, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6, long-grained rice

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OsI_01311	OsI_01353	A2WN85	A2WNC7	Uncharacterized protein.	Uncharacterized protein.	0.860
OsI_01311	OsI_01614	A2WN85	B8A722	Uncharacterized protein.	Uncharacterized protein.	0.860
OsI_01311	OsI_02152	A2WN85	A2WQL6	Uncharacterized protein.	PCI domain-containing protein.	0.970
OsI_01311	OsI_10521	A2WN85	B8AQT0	Uncharacterized protein.	PCI domain-containing protein.	0.970
OsI_01311	OsI_12343	A2WN85	B8AL50	Uncharacterized protein.	PCI domain-containing protein.	0.967
OsI_01311	OsI_14352	A2WN85	B8ANQ0	Uncharacterized protein.	PCI domain-containing protein.	0.989
OsI_01311	OsI_16043	A2WN85	A2XTW4	Uncharacterized protein.	PCI domain-containing protein.	0.967
OsI_01311	OsI_21232	A2WN85	B8AXH4	Uncharacterized protein.	RPN13_C domain-containing protein.	0.973
OsI_01311	OsI_25803	A2WN85	B8B5M9	Uncharacterized protein.	PCI domain-containing protein.	0.988
OsI_01311	OsI_30168	A2WN85	B8B9E1	Uncharacterized protein.	PCI domain-containing protein.	0.968
OsI_01311	OsI_32229	A2WN85	A2Z3M0	Uncharacterized protein.	PCI domain-containing protein.	0.968
OsI_01313	OsI_01353	A2WN87	A2WNC7	MPN domain-containing protein.	Uncharacterized protein.	0.860
OsI_01313	OsI_01614	A2WN87	B8A722	MPN domain-containing protein.	Uncharacterized protein.	0.860
OsI_01313	OsI_02152	A2WN87	A2WQL6	MPN domain-containing protein.	PCI domain-containing protein.	0.970
OsI_01313	OsI_10521	A2WN87	B8AQT0	MPN domain-containing protein.	PCI domain-containing protein.	0.970
OsI_01313	OsI_12343	A2WN87	B8AL50	MPN domain-containing protein.	PCI domain-containing protein.	0.967
OsI_01313	OsI_14352	A2WN87	B8ANQ0	MPN domain-containing protein.	PCI domain-containing protein.	0.989
OsI_01313	OsI_16043	A2WN87	A2XTW4	MPN domain-containing protein.	PCI domain-containing protein.	0.967
OsI_01313	OsI_21232	A2WN87	B8AXH4	MPN domain-containing protein.	RPN13_C domain-containing protein.	0.973
OsI_01313	OsI_25803	A2WN87	B8B5M9	MPN domain-containing protein.	PCI domain-containing protein.	0.988

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