STRINGSTRING
BDP_0104 BDP_0104 pxpA pxpA BDP_0106 BDP_0106 BDP_0107 BDP_0107 BDP_0108 BDP_0108 BDP_0267 BDP_0267 birA birA accC accC accD accD fas fas acpS acpS BDP_0365 BDP_0365 lemA lemA BDP_0369 BDP_0369 BDP_0375 BDP_0375 BDP_0376 BDP_0376 pcp pcp pepC2 pepC2 aroG2 aroG2 aroG1 aroG1 BDP_0526 BDP_0526 BDP_1310 BDP_1310
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDP_0104Conserved hypothetical protein; Belongs to the D-glutamate cyclase family. (261 aa)
pxpALamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (291 aa)
BDP_0106Urea amidolyase related protein. (603 aa)
BDP_0107Biotin-dependent acyl-CoA carboxylase. (606 aa)
BDP_0108Conserved hypothetical protein. (342 aa)
BDP_0267Transcriptional regulator, IclR family. (273 aa)
birABiotin--acetyl-CoA-carboxylase ligase BirA. (260 aa)
accCaccC Acetyl-/propionyl-CoA carboxylase alpha chain. (620 aa)
accDaccD Acetyl-/propionyl-CoA carboxylase beta chain. (533 aa)
fasFatty acid synthase Fas. (3117 aa)
acpSPutative holo-[acyl-carrier protein] synthase3; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (151 aa)
BDP_0365Narrowly conserved hypothetical membrane spanning protein. (228 aa)
lemAlemA LemA protein. (187 aa)
BDP_0369Conserved hypothetical membrane spanning protein. (763 aa)
BDP_0375U32-family peptidase. (514 aa)
BDP_0376Conserved hypothetical protein. (338 aa)
pcpPcp Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline. (229 aa)
pepC2pepC2 Aminopeptidase C; Belongs to the peptidase C1 family. (447 aa)
aroG2aroG2 3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (390 aa)
aroG1aroG1 3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (400 aa)
BDP_0526Conserved hypothetical membrane protein. (137 aa)
BDP_1310ATP-dependent carboxylate-amine ligase. (410 aa)
Your Current Organism:
Bifidobacterium dentium
NCBI taxonomy Id: 401473
Other names: B. dentium Bd1, Bifidobacterium dentium Bd1, Bifidobacterium dentium str. Bd1, Bifidobacterium dentium strain Bd1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.