(25 nodes) 90S preribosome network (Ceraceosorus bombacis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0P1BID2	WD40-repeat-containing subunit of the 18S rRNA processing complex. (1057 aa)
	A0A0P1BJE4	Uncharacterized conserved protein. (1658 aa)
	A0A0P1BJJ4	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (452 aa)
	A0A0P1BL98	RNA 3'-terminal phosphate cyclase. (413 aa)
	A0A0P1BM15	DRIM (Down-regulated in metastasis)-like proteins. (2860 aa)
	A0A0P1BM90	WD repeat protein. (1263 aa)
	A0A0P1BMH8	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (319 aa)
	A0A0P1BMS8	Alpha-l rna-binding motif-containing protein. (182 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (871 aa)
	A0A0P1BP49	Uncharacterized protein. (477 aa)
	A0A0P1BPG0	Uncharacterized protein. (738 aa)
	A0A0P1BQ87	WD40 repeat protein. (648 aa)
	A0A0P1BQG0	WD40-repeat-containing subunit of the 18S rRNA processing complex. (926 aa)
	A0A0P1BRK0	SRF-DEPENDENT TRANSCRIPTION REGULATION ASSOCIATED PROTEIN. (683 aa)
	A0A0N7L9I3	Brix-domain-containing protein. (300 aa)
	A0A0N7LAK2	Predicted nucleolar protein involved in ribosome biogenesis. (788 aa)
	A0A0N7LB15	KRR1-interacting protein involved in 40S ribosome biogenesis. (700 aa)
	A0A0P1B9C5	U3 small nucleolar RNA-associated protein 22. (1115 aa)
	A0A0P1BA35	Duf663-domain-containing protein. (965 aa)
	A0A0P1BAI7	UTP4, CIRH1A. (130 aa)
	A0A0P1BBD8	Nucleolar protein involved in 40S ribosome biogenesis. (990 aa)
	A0A0P1BBZ8	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (792 aa)
	A0A0P1BDX8	HAT (Half-A-TPR) repeat-containing protein. (917 aa)
	A0A0P1BEM0	Probable protein kinase ck2 alpha subunit; Belongs to the protein kinase superfamily. (361 aa)
	A0A0P1BF52	rRNA processing protein RRP7. (409 aa)

Your Current Organism:

Ceraceosorus bombacis

NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0N7L9I3	A0A0N7LAK2	A0A0N7L9I3	A0A0N7LAK2	Brix-domain-containing protein.	Predicted nucleolar protein involved in ribosome biogenesis.	0.994
A0A0N7L9I3	A0A0N7LB15	A0A0N7L9I3	A0A0N7LB15	Brix-domain-containing protein.	KRR1-interacting protein involved in 40S ribosome biogenesis.	0.738
A0A0N7L9I3	A0A0P1B9C5	A0A0N7L9I3	A0A0P1B9C5	Brix-domain-containing protein.	U3 small nucleolar RNA-associated protein 22.	0.998
A0A0N7L9I3	A0A0P1BA35	A0A0N7L9I3	A0A0P1BA35	Brix-domain-containing protein.	Duf663-domain-containing protein.	0.997
A0A0N7L9I3	A0A0P1BAI7	A0A0N7L9I3	A0A0P1BAI7	Brix-domain-containing protein.	UTP4, CIRH1A.	0.998
A0A0N7L9I3	A0A0P1BBD8	A0A0N7L9I3	A0A0P1BBD8	Brix-domain-containing protein.	Nucleolar protein involved in 40S ribosome biogenesis.	0.980
A0A0N7L9I3	A0A0P1BBZ8	A0A0N7L9I3	A0A0P1BBZ8	Brix-domain-containing protein.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.606
A0A0N7L9I3	A0A0P1BDX8	A0A0N7L9I3	A0A0P1BDX8	Brix-domain-containing protein.	HAT (Half-A-TPR) repeat-containing protein.	0.989
A0A0N7L9I3	A0A0P1BF52	A0A0N7L9I3	A0A0P1BF52	Brix-domain-containing protein.	rRNA processing protein RRP7.	0.991
A0A0N7L9I3	A0A0P1BID2	A0A0N7L9I3	A0A0P1BID2	Brix-domain-containing protein.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.983
A0A0N7L9I3	A0A0P1BJE4	A0A0N7L9I3	A0A0P1BJE4	Brix-domain-containing protein.	Uncharacterized conserved protein.	0.997
A0A0N7L9I3	A0A0P1BJJ4	A0A0N7L9I3	A0A0P1BJJ4	Brix-domain-containing protein.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.933
A0A0N7L9I3	A0A0P1BL98	A0A0N7L9I3	A0A0P1BL98	Brix-domain-containing protein.	RNA 3'-terminal phosphate cyclase.	0.992
A0A0N7L9I3	A0A0P1BM15	A0A0N7L9I3	A0A0P1BM15	Brix-domain-containing protein.	DRIM (Down-regulated in metastasis)-like proteins.	0.992
A0A0N7L9I3	A0A0P1BM90	A0A0N7L9I3	A0A0P1BM90	Brix-domain-containing protein.	WD repeat protein.	0.998
A0A0N7L9I3	A0A0P1BMH8	A0A0N7L9I3	A0A0P1BMH8	Brix-domain-containing protein.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.721
A0A0N7L9I3	A0A0P1BMS8	A0A0N7L9I3	A0A0P1BMS8	Brix-domain-containing protein.	Alpha-l rna-binding motif-containing protein.	0.999
A0A0N7L9I3	A0A0P1BPG0	A0A0N7L9I3	A0A0P1BPG0	Brix-domain-containing protein.	Uncharacterized protein.	0.853
A0A0N7L9I3	A0A0P1BQ87	A0A0N7L9I3	A0A0P1BQ87	Brix-domain-containing protein.	WD40 repeat protein.	0.994
A0A0N7L9I3	A0A0P1BQG0	A0A0N7L9I3	A0A0P1BQG0	Brix-domain-containing protein.	WD40-repeat-containing subunit of the 18S rRNA processing complex.	0.998