(48 nodes) Histidine kinase domain network (Lechevalieria xinjiangensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SER27759.1	Two-component system, OmpR family, sensor histidine kinase MtrB. (585 aa)
	SER44313.1	Two-component system, OmpR family, sensor kinase. (463 aa)
	SER46262.1	Signal transduction histidine kinase. (481 aa)
	SER54673.1	Two-component system, OmpR family, sensor histidine kinase KdpD. (829 aa)
	SER62929.1	HAMP domain-containing protein. (506 aa)
	SER60109.1	Signal transduction histidine kinase. (1382 aa)
	SER60364.1	Signal transduction histidine kinase. (421 aa)
	SER76089.1	Signal transduction histidine kinase. (455 aa)
	SER84494.1	Two-component system, OmpR family, sensor histidine kinase MtrB. (448 aa)
	SER85650.1	Two-component system, LytT family, sensor kinase. (391 aa)
	SER82247.1	Signal transduction histidine kinase. (434 aa)
	SER92248.1	Signal transduction histidine kinase. (386 aa)
	SER89633.1	Two-component system, OmpR family, sensor histidine kinase MprB. (477 aa)
	SER99601.1	Two-component system, OmpR family, sensor histidine kinase BaeS. (599 aa)
	SES04809.1	DNA-binding transcriptional regulator, LacI/PurR family. (937 aa)
	SES06964.1	Two-component system, OmpR family, sensor kinase. (490 aa)
	SES07091.1	Two-component system, OmpR family, sensor histidine kinase MtrB. (471 aa)
	SES10861.1	Signal transduction histidine kinase. (689 aa)
	SES18117.1	Two-component system, OmpR family, sensor histidine kinase BaeS. (580 aa)
	SES29028.1	Signal transduction histidine kinase. (879 aa)
	SES33611.1	Cyclic nucleotide-binding domain-containing protein. (470 aa)
	SES36426.1	Signal transduction histidine kinase. (440 aa)
	SEP95182.1	Signal transduction histidine kinase. (424 aa)
	SEP72353.1	Signal transduction histidine kinase. (384 aa)
	SEP78411.1	Sensor histidine kinase regulating citrate/malate metabolism. (512 aa)
	SEP82713.1	Two-component system, OmpR family, sensor histidine kinase SenX3. (390 aa)
	SEQ15315.1	Signal transduction histidine kinase. (419 aa)
	SEQ20496.1	His Kinase A (phospho-acceptor) domain-containing protein. (300 aa)
	SEQ20805.1	Two-component system, OmpR family, sensor histidine kinase MprB. (461 aa)
	SEQ23329.1	Signal transduction histidine kinase. (380 aa)
	SEQ25353.1	Two-component system, OmpR family, sensor histidine kinase MtrB. (458 aa)
	SEQ28261.1	Two-component system, OmpR family, sensor kinase. (490 aa)
	SEQ10847.1	Signal transduction histidine kinase. (422 aa)
	SEQ48022.1	Two-component system, CitB family, sensor kinase. (523 aa)
	SEQ50470.1	Signal transduction histidine kinase. (457 aa)
	SEQ69211.1	Signal transduction histidine kinase. (461 aa)
	SEQ72211.1	Hypothetical protein. (375 aa)
	SEQ81241.1	Signal transduction histidine kinase. (418 aa)
	SEQ82127.1	DNA-binding transcriptional regulator, LacI/PurR family. (1005 aa)
	SEQ91027.1	Signal transduction histidine kinase. (576 aa)
	SEQ92032.1	PAS/PAC sensor hybrid histidine kinase. (1413 aa)
	SEQ92754.1	HAMP domain-containing protein. (513 aa)
	SEQ87174.1	Signal transduction histidine kinase. (459 aa)
	SEQ93629.1	GAF sensor hybrid histidine kinase. (1509 aa)
	SEQ86704.1	Signal transduction histidine kinase. (454 aa)
	SER25161.1	His Kinase A (phospho-acceptor) domain-containing protein. (332 aa)
	SER27276.1	Two-component sensor histidine kinase, contains HisKA and HATPase domains. (456 aa)
	SER34694.1	Two-component system, OmpR family, sensor histidine kinase MprB. (453 aa)

Your Current Organism:

Lechevalieria xinjiangensis

NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEP72353.1	SEQ82127.1	SAMN05216188_101289	SAMN05216188_105224	Signal transduction histidine kinase.	DNA-binding transcriptional regulator, LacI/PurR family.	0.645
SEP72353.1	SEQ92032.1	SAMN05216188_101289	SAMN05216188_106217	Signal transduction histidine kinase.	PAS/PAC sensor hybrid histidine kinase.	0.457
SEP72353.1	SER60109.1	SAMN05216188_101289	SAMN05216188_11352	Signal transduction histidine kinase.	Signal transduction histidine kinase.	0.852
SEP78411.1	SEQ82127.1	SAMN05216188_101475	SAMN05216188_105224	Sensor histidine kinase regulating citrate/malate metabolism.	DNA-binding transcriptional regulator, LacI/PurR family.	0.847
SEP78411.1	SEQ92032.1	SAMN05216188_101475	SAMN05216188_106217	Sensor histidine kinase regulating citrate/malate metabolism.	PAS/PAC sensor hybrid histidine kinase.	0.811
SEP78411.1	SER60109.1	SAMN05216188_101475	SAMN05216188_11352	Sensor histidine kinase regulating citrate/malate metabolism.	Signal transduction histidine kinase.	0.853
SEP78411.1	SES04809.1	SAMN05216188_101475	SAMN05216188_120103	Sensor histidine kinase regulating citrate/malate metabolism.	DNA-binding transcriptional regulator, LacI/PurR family.	0.726
SEP82713.1	SEQ81241.1	SAMN05216188_101612	SAMN05216188_105196	Two-component system, OmpR family, sensor histidine kinase SenX3.	Signal transduction histidine kinase.	0.403
SEP82713.1	SEQ82127.1	SAMN05216188_101612	SAMN05216188_105224	Two-component system, OmpR family, sensor histidine kinase SenX3.	DNA-binding transcriptional regulator, LacI/PurR family.	0.932
SEP82713.1	SEQ92032.1	SAMN05216188_101612	SAMN05216188_106217	Two-component system, OmpR family, sensor histidine kinase SenX3.	PAS/PAC sensor hybrid histidine kinase.	0.896
SEP82713.1	SEQ92754.1	SAMN05216188_101612	SAMN05216188_106243	Two-component system, OmpR family, sensor histidine kinase SenX3.	HAMP domain-containing protein.	0.723
SEP82713.1	SEQ93629.1	SAMN05216188_101612	SAMN05216188_106277	Two-component system, OmpR family, sensor histidine kinase SenX3.	GAF sensor hybrid histidine kinase.	0.482
SEP82713.1	SER46262.1	SAMN05216188_101612	SAMN05216188_111263	Two-component system, OmpR family, sensor histidine kinase SenX3.	Signal transduction histidine kinase.	0.476
SEP82713.1	SER60109.1	SAMN05216188_101612	SAMN05216188_11352	Two-component system, OmpR family, sensor histidine kinase SenX3.	Signal transduction histidine kinase.	0.973
SEP82713.1	SER62929.1	SAMN05216188_101612	SAMN05216188_113152	Two-component system, OmpR family, sensor histidine kinase SenX3.	HAMP domain-containing protein.	0.728
SEP82713.1	SER84494.1	SAMN05216188_101612	SAMN05216188_116102	Two-component system, OmpR family, sensor histidine kinase SenX3.	Two-component system, OmpR family, sensor histidine kinase MtrB.	0.456
SEP82713.1	SES04809.1	SAMN05216188_101612	SAMN05216188_120103	Two-component system, OmpR family, sensor histidine kinase SenX3.	DNA-binding transcriptional regulator, LacI/PurR family.	0.623
SEP82713.1	SES07091.1	SAMN05216188_101612	SAMN05216188_12125	Two-component system, OmpR family, sensor histidine kinase SenX3.	Two-component system, OmpR family, sensor histidine kinase MtrB.	0.441
SEP95182.1	SEQ82127.1	SAMN05216188_1011027	SAMN05216188_105224	Signal transduction histidine kinase.	DNA-binding transcriptional regulator, LacI/PurR family.	0.924
SEP95182.1	SEQ92032.1	SAMN05216188_1011027	SAMN05216188_106217	Signal transduction histidine kinase.	PAS/PAC sensor hybrid histidine kinase.	0.890