(55 nodes) Thioredoxin-like superfamily network (Pedobacter terrae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDH31610.1	Peroxiredoxin. (381 aa)
	SDG30804.1	Peroxiredoxin. (382 aa)
	SDG30863.1	AhpC/TSA family protein. (653 aa)
	SDG31008.1	Peroxiredoxin. (154 aa)
	SDG50828.1	Thiol-disulfide isomerase or thioredoxin. (390 aa)
	SDG50856.1	Peroxiredoxin. (372 aa)
	SDG50427.1	Peroxiredoxin. (380 aa)
	SDG61220.1	Peroxiredoxin. (188 aa)
	SDG61851.1	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)
	SDG57322.1	Thiol-disulfide isomerase or thioredoxin. (391 aa)
	SDG58751.1	Thiol:disulfide interchange protein DsbD. (549 aa)
	SDG66187.1	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)
	SDG74866.1	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family. (378 aa)
	SDG74896.1	Peroxiredoxin. (372 aa)
	SDG82490.1	Thiol-disulfide isomerase or thioredoxin. (383 aa)
	SDG77975.1	Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family. (115 aa)
	SDG86129.1	Thioredoxin. (102 aa)
	SDG86172.1	Peroxiredoxin (alkyl hydroperoxide reductase subunit C). (210 aa)
	SDG94267.1	Peroxiredoxin Q/BCP. (154 aa)
	SDG98446.1	Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). (211 aa)
	SDG97203.1	Selenoprotein W-related protein. (93 aa)
	SDH09602.1	Thioredoxin. (172 aa)
	SDH08945.1	Peroxiredoxin. (638 aa)
	SDH09458.1	Thioredoxin; Belongs to the thioredoxin family. (106 aa)
	SDH09579.1	Peroxiredoxin. (153 aa)
	SDH24912.1	Peroxiredoxin. (193 aa)
	SDH30904.1	Thiol-disulfide isomerase or thioredoxin. (191 aa)
	SDH71368.1	Thiol-disulfide isomerase or thioredoxin. (454 aa)
	SDH65896.1	Hypothetical protein. (669 aa)
	SDH56317.1	NADH-quinone oxidoreductase subunit E. (171 aa)
	SDH36600.1	Peroxiredoxin. (392 aa)
	SDH36382.1	Peroxiredoxin. (307 aa)
	SDH36272.1	Peroxiredoxin. (361 aa)
	SDH36235.1	Peroxiredoxin. (427 aa)
	SDH36196.1	Thiol-disulfide isomerase or thioredoxin. (406 aa)
	SDH36169.1	Peroxiredoxin. (471 aa)
	SDF67279.1	Peroxiredoxin. (377 aa)
	SDF67354.1	Peroxiredoxin. (427 aa)
	SDF62704.1	Thioredoxin. (172 aa)
	SDF70521.1	Thioredoxin 1. (98 aa)
	SDF71104.1	Peroxiredoxin. (370 aa)
	SDF72624.1	Thiol-disulfide isomerase or thioredoxin. (238 aa)
	SDF74039.1	Protein SCO1/2. (216 aa)
	SDF78294.1	AhpC/TSA family protein. (155 aa)
	SDF62198.1	Arsenate reductase; Belongs to the ArsC family. (114 aa)
	SDF95350.1	Thiol-disulfide isomerase or thioredoxin. (432 aa)
	SDF97527.1	Thiol-disulfide isomerase or thioredoxin. (408 aa)
	SDF98065.1	Thioredoxin. (171 aa)
	SDF89484.1	AhpC/TSA family protein. (159 aa)
	SDG04043.1	Predicted dithiol-disulfide isomerase, DsbA family. (238 aa)
	SDG08529.1	Peroxiredoxin. (190 aa)
	SDG04599.1	Thiol:disulfide interchange protein DsbD. (564 aa)
	SDG21809.1	Thioredoxin. (199 aa)
	SDG24537.1	Protein SCO1/2. (231 aa)
	SDG18932.1	Thioredoxin-like. (177 aa)

Your Current Organism:

Pedobacter terrae

NCBI taxonomy Id: 405671
Other names: DSM 17933, KCTC 12762, Pedobacter sp. DS-57, Pedobacter terrae Yoon et al. 2007, strain DS-57

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDF62198.1	SDG04043.1	SAMN05421827_1016	SAMN05421827_10311	Arsenate reductase; Belongs to the ArsC family.	Predicted dithiol-disulfide isomerase, DsbA family.	0.864
SDF62704.1	SDF74039.1	SAMN05421827_10122	SAMN05421827_101378	Thioredoxin.	Protein SCO1/2.	0.400
SDF62704.1	SDG04599.1	SAMN05421827_10122	SAMN05421827_10331	Thioredoxin.	Thiol:disulfide interchange protein DsbD.	0.408
SDF62704.1	SDG24537.1	SAMN05421827_10122	SAMN05421827_104256	Thioredoxin.	Protein SCO1/2.	0.400
SDF62704.1	SDG58751.1	SAMN05421827_10122	SAMN05421827_10877	Thioredoxin.	Thiol:disulfide interchange protein DsbD.	0.408
SDF62704.1	SDG86172.1	SAMN05421827_10122	SAMN05421827_11228	Thioredoxin.	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	0.486
SDF62704.1	SDG98446.1	SAMN05421827_10122	SAMN05421827_11444	Thioredoxin.	Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).	0.486
SDF67279.1	SDF72624.1	SAMN05421827_101158	SAMN05421827_101332	Peroxiredoxin.	Thiol-disulfide isomerase or thioredoxin.	0.750
SDF67279.1	SDG08529.1	SAMN05421827_101158	SAMN05421827_103176	Peroxiredoxin.	Peroxiredoxin.	0.684
SDF67279.1	SDG30863.1	SAMN05421827_101158	SAMN05421827_10580	Peroxiredoxin.	AhpC/TSA family protein.	0.642
SDF67279.1	SDG82490.1	SAMN05421827_101158	SAMN05421827_111178	Peroxiredoxin.	Thiol-disulfide isomerase or thioredoxin.	0.507
SDF70521.1	SDG86172.1	SAMN05421827_101260	SAMN05421827_11228	Thioredoxin 1.	Peroxiredoxin (alkyl hydroperoxide reductase subunit C).	0.431
SDF70521.1	SDG98446.1	SAMN05421827_101260	SAMN05421827_11444	Thioredoxin 1.	Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).	0.431
SDF71104.1	SDF72624.1	SAMN05421827_101280	SAMN05421827_101332	Peroxiredoxin.	Thiol-disulfide isomerase or thioredoxin.	0.766
SDF71104.1	SDG82490.1	SAMN05421827_101280	SAMN05421827_111178	Peroxiredoxin.	Thiol-disulfide isomerase or thioredoxin.	0.569
SDF72624.1	SDF67279.1	SAMN05421827_101332	SAMN05421827_101158	Thiol-disulfide isomerase or thioredoxin.	Peroxiredoxin.	0.750
SDF72624.1	SDF71104.1	SAMN05421827_101332	SAMN05421827_101280	Thiol-disulfide isomerase or thioredoxin.	Peroxiredoxin.	0.766
SDF72624.1	SDF95350.1	SAMN05421827_101332	SAMN05421827_102234	Thiol-disulfide isomerase or thioredoxin.	Thiol-disulfide isomerase or thioredoxin.	0.757
SDF72624.1	SDF97527.1	SAMN05421827_101332	SAMN05421827_102290	Thiol-disulfide isomerase or thioredoxin.	Thiol-disulfide isomerase or thioredoxin.	0.565
SDF72624.1	SDG30863.1	SAMN05421827_101332	SAMN05421827_10580	Thiol-disulfide isomerase or thioredoxin.	AhpC/TSA family protein.	0.528