STRINGSTRING
GCA_000934765_01277 GCA_000934765_01277 GCA_000934765_02039 GCA_000934765_02039 GCA_000934765_02144 GCA_000934765_02144 GCA_000934765_02463 GCA_000934765_02463 GCA_000934765_02464 GCA_000934765_02464
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000934765_01277Unannotated protein. (495 aa)
GCA_000934765_02039Unannotated protein. (329 aa)
GCA_000934765_02144Unannotated protein. (74 aa)
GCA_000934765_02463Unannotated protein. (1410 aa)
GCA_000934765_02464Unannotated protein. (1352 aa)
Your Current Organism:
Thiomicrospira microaerophila
NCBI taxonomy Id: 406020
Other names: DSM 17327, T. microaerophila, Thioalkalimicrobium microaerophilum, Thioalkalimicrobium microaerophilum Sorokin et al. 2007, Thiomicrospira microaerophila (Sorokin et al. 2007) Boden et al. 2017, UNIQEM U242, gamma proteobacterium ASL8.2, strain ASL8-2
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