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| | ABR54271.1 | H(+)-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; KEGG: mmp:MMP1039 A1A0 ATPase, subunit I; Belongs to the V-ATPase 116 kDa subunit family. (689 aa) |
| | atpB | H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (462 aa) |
| | ABR54313.1 | TIGRFAM: methyltransferase FkbM family; KEGG: net:Neut_2142 methyltransferase FkbM family protein. (237 aa) |
| | ABR54314.1 | PFAM: Methyltransferase type 11; KEGG: gsu:GSU0630 hypothetical protein. (244 aa) |
| | ABR54321.1 | PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mja:MJ1054 UDP-glucose dehydrogenase, putative. (440 aa) |
| | ABR54358.1 | PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mmp:MMP1129 peptidyl-prolyl cis-trans isomerase, cyclophilin type. (163 aa) |
| | endA | tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. (177 aa) |
| | rpl37e | Ribosomal protein L37e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (64 aa) |
| | ABR54400.1 | KEGG: mmp:MMP1175 hypothetical protein. (359 aa) |
| | ABR54423.1 | PFAM: nuclease (SNase domain protein); KEGG: mmp:MMP1201 Staphylococcus nuclease (SNase-like):thermonuclease. (189 aa) |
| | rps6e | PFAM: Ribosomal protein S6e; KEGG: mmp:MMP1207 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (118 aa) |
| | ABR54441.1 | SMART: DEXDc2; helicase c2; DEAD-like helicases; KEGG: mmp:MMP1219 putative DinG ATP-dependent helicase. (669 aa) |
| | ABR55592.1 | PFAM: AMMECR1 domain protein; KEGG: mmp:MMP0546 hypothetical protein. (203 aa) |
| | ABR55576.1 | Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. (78 aa) |
| | ABR55525.1 | TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: nmc:NMC1520 C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (368 aa) |
| | ABR55521.1 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mmp:MMP0457 probable ATP dependent RNA helicase; Belongs to the DEAD box helicase family. (538 aa) |
| | ABR55516.1 | PFAM: protein of unknown function DUF74; KEGG: ttj:TTHA1944 hypothetical protein; Belongs to the UPF0145 family. (105 aa) |
| | rpl24e | Ribosomal protein L24E; Binds to the 23S rRNA. (62 aa) |
| | rps28e | PFAM: Ribosomal protein S28e; KEGG: mmp:MMP0640 SSU ribosomal protein S28E; Belongs to the eukaryotic ribosomal protein eS28 family. (76 aa) |
| | nifH | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (275 aa) |
| | rpl7ae | Ribosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (136 aa) |
| | rps2 | PFAM: ribosomal protein S2; KEGG: mmp:MMP0667 SSU ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (221 aa) |
| | rps3ae | PFAM: ribosomal protein S3Ae; KEGG: mmp:MMP0669 SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family. (220 aa) |
| | ABR55401.1 | PFAM: methyltransferase small; KEGG: mmp:MMP0685 SAM (and some other nucleotide) binding motif:N-6 adenine-specific DNA methylase. (207 aa) |
| | rpl34e | PFAM: Ribosomal protein L34e; KEGG: mmp:MMP0627 ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. (89 aa) |
| | rpl14e | KOW motif; KEGG: mmp:MMP0625 KOW motif; Belongs to the eukaryotic ribosomal protein eL14 family. (77 aa) |
| | ABR55389.1 | PFAM: ADP-ribosylation/Crystallin J1; KEGG: mmp:MMP0622 ADP-ribosylglycohydrolase (draG) homolog. (302 aa) |
| | ABR55371.1 | PFAM: KH type 1 domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. (184 aa) |
| | ABR55361.1 | Soluble liver antigen/liver pancreas antigen; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family. (436 aa) |
| | rps17e | KEGG: mmp:MMP0577 30S ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family. (63 aa) |
| | rps27ae | PFAM: Ribosomal protein S27a; KEGG: mmp:MMP0444 SSU ribosomal protein S27AE; Belongs to the eukaryotic ribosomal protein eS31 family. (71 aa) |
| | rps24e | PFAM: Ribosomal protein S24e; KEGG: mmp:MMP0443 SSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. (100 aa) |
| | ABR55312.1 | PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mmp:MMP0431 putative mRNA 3-end processing factor. (433 aa) |
| | rfcS | Replication factor C; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. (315 aa) |
| | ABR55292.1 | PFAM: CBS domain containing protein; KEGG: mmp:MMP0407 hypothetical protein. (137 aa) |
| | ABR55291.1 | TIGRFAM: putative TIM-barrel protein; KEGG: mmp:MMP0406 putative TIM-barrel protein. (265 aa) |
| | ABR53971.1 | Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP0863 CBS domain. (158 aa) |
| | hel308 | DEAD/DEAH box helicase domain protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (751 aa) |
| | ABR53944.1 | PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: mmp:MMP0891 exonuclease. (189 aa) |
| | ABR53935.1 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Nucleolar GTP-binding 1; KEGG: mmp:MMP0901 ATP/GTP-binding site motif A (P-loop):small GTP-binding protein domain. (347 aa) |
| | rnz | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (315 aa) |
| | ABR53928.1 | Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP0908 CBS domain. (127 aa) |
| | ABR54471.1 | KEGG: mmp:MMP1250 6-pyruvoyl tetrahydropterin synthase. (167 aa) |
| | ABR54472.1 | Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP1251 hypothetical protein. (188 aa) |
| | ABR54473.1 | PFAM: CBS domain containing protein; KEGG: mmp:MMP1252 CBS domain. (279 aa) |
| | dnaG | TOPRIM domain protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (443 aa) |
| | rpl10e | TIGRFAM: ribosomal protein L10.e; PFAM: Ribosomal protein L10E; KEGG: mmp:MMP1289 ribosomal protein L10E; Belongs to the universal ribosomal protein uL16 family. (186 aa) |
| | fen | XPG I; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genom [...] (324 aa) |
| | rps13 | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (149 aa) |
| | rps4 | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (178 aa) |
| | rps11 | Ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (124 aa) |
| | rpl18e | PFAM: ribosomal protein L15; KEGG: mmp:MMP1323 LSU ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family. (120 aa) |
| | rpl13 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (137 aa) |
| | rps9 | PFAM: ribosomal protein S9; KEGG: mmp:MMP1325 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (134 aa) |
| | ABR54551.1 | PFAM: GTP-binding protein HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. (374 aa) |
| | ABR54556.1 | PFAM: methyltransferase small; protein of unknown function DUF890; KEGG: mmp:MMP1339 SAM (and some other nucleotide) binding motif. (268 aa) |
| | mre11 | Metallophosphoesterase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family. (375 aa) |
| | ABR54559.1 | SMART: Nucleotide binding protein PINc; KEGG: mmp:MMP1342 hypothetical protein. (131 aa) |
| | ABR54564.1 | PFAM: Transcription factor CBF/NF-Y/archaeal histone; Histone core; KEGG: mmp:MMP1347 archaeal histone B. (66 aa) |
| | thi4 | Thiazole biosynthesis enzyme; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. (261 aa) |
| | rpl30e | PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: mmp:MMP1365 ribosomal protein L30E; Belongs to the eukaryotic ribosomal protein eL30 family. (105 aa) |
| | rps12 | Ribosomal protein S23 (S12); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (147 aa) |
| | rps7 | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (188 aa) |
| | rps10 | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | ABR54597.1 | PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mmp:MMP1381 beta-lactamase-like:ATP/GTP-binding site motif A (P-loop). (421 aa) |
| | ABR54603.1 | PFAM: protein of unknown function DUF52; KEGG: mmp:MMP1387 hypothetical protein; Belongs to the MEMO1 family. (284 aa) |
| | ABR54604.1 | Redox-active disulfide protein 2; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro. (80 aa) |
| | ABR54612.1 | ERCC4 domain protein; PFAM: helix-hairpin-helix motif; helicase domain protein; ERCC4 domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; DEAD-like helicases; KEGG: mmp:MMP1395 helix-hairpin-helix motif:DEAD/DEAH box helicase:helicase, C-terminal:helix-hairpin-helix DNA-binding, class 1:ERCC4 domain. (776 aa) |
| | smc | Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1189 aa) |
| | rpl22 | Ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (153 aa) |
| | rps3 | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (211 aa) |
| | rpl29 | PFAM: ribosomal protein L29; KEGG: mmp:MMP1405 LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (71 aa) |
| | rps17 | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (109 aa) |
| | rpl14 | Ribosomal protein L14b/L23e; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (132 aa) |
| | rpl24 | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (119 aa) |
| | rps4e | PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E-like; Ribosomal protein S4E, central; KEGG: mmp:MMP1411 SSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family. (244 aa) |
| | rpl5 | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (181 aa) |
| | rps14 | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. (53 aa) |
| | rps8 | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rpl6 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (182 aa) |
| | rpl32e | PFAM: Ribosomal protein L32e; KEGG: mmp:MMP1416 LSU ribosomal protein L32E; Belongs to the eukaryotic ribosomal protein eL32 family. (135 aa) |
| | rpl19e | Ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (149 aa) |
| | rpl18 | Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (193 aa) |
| | rps5 | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. (225 aa) |
| | rpl30 | TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: mmp:MMP1420 LSU ribosomal protein L30P. (154 aa) |
| | rpl15 | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (143 aa) |
| | ABR54646.1 | TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: mmp:MMP1429 transcription factor TFIIS:DNA-directed RNA polymerase, M/15 kDa subunit; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (105 aa) |
| | rpl11 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (159 aa) |
| | spt5 | NusG antitermination factor; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (146 aa) |
| | top6A | DNA topoisomerase (ATP-hydrolyzing); Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. (365 aa) |
| | ABR54748.1 | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmp:MMP1529 hypothetical protein. (237 aa) |
| | ABR54753.1 | Conserved hypothetical protein; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. (183 aa) |
| | rpl3 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (334 aa) |
| | rpl4 | Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (252 aa) |
| | rpl23 | Ribosomal protein L25/L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (86 aa) |
| | rpl2 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (240 aa) |
| | rps19 | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (160 aa) |
| | ubiX | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (185 aa) |
| | bioF | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (370 aa) |
| | rps15 | PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: mmp:MMP1579 probable SSU ribosomal protein S15P/S13E. (151 aa) |
| | ABR54798.1 | TIGRFAM: putative DNA helicase; KEGG: mmp:MMP1581 putative DNA helicase. (633 aa) |
| | albA | DNA-binding protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. (89 aa) |
| | ABR54831.1 | Putative translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily. (323 aa) |
| | ABR54850.1 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: mmp:MMP1642 ATP/GTP-binding site motif A (P-loop):small GTP-binding protein domain. (184 aa) |
| | ABR54854.1 | PFAM: helix-turn-helix domain protein; KEGG: mmp:MMP1646 conserved hypothetical archaeal protein. (159 aa) |
| | rps8e | TIGRFAM: ribosomal protein S8e; PFAM: Ribosomal protein S8E; KEGG: mmp:MMP1658 SSU ribosomal protein S8E. (128 aa) |
| | ABR54881.1 | PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; KEGG: mmp:MMP1678 endonuclease IV. (273 aa) |
| | truB | Putative rRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. (359 aa) |
| | nop10 | Nucleolar RNA-binding protein Nop10p; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. (52 aa) |
| | rps27e | PFAM: Ribosomal protein S27E; KEGG: mmp:MMP1708 SSU ribosomal protein S27E. (61 aa) |
| | rpl44e | Ribosomal protein L44E; Binds to the 23S rRNA. (93 aa) |
| | ABR54920.1 | TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; protein of unknown function ATP binding; Miro domain protein; SMART: Ras small GTPase, Rab type; KEGG: mmp:MMP1715 putative GTPase. (158 aa) |
| | ABR54922.1 | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mmp:MMP1717 possible methyltransferase related protein. (358 aa) |
| | tfe | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] (185 aa) |
| | ABR54942.1 | KEGG: mmp:MMP0042 hypothetical protein. (89 aa) |
| | ABR54947.1 | KEGG: mmp:MMP0042 hypothetical protein. (89 aa) |
| | ABR54952.1 | KEGG: mmp:MMP0042 hypothetical protein. (89 aa) |
| | ABR54957.1 | KEGG: mmp:MMP0042 hypothetical protein. (89 aa) |
| | ABR54970.1 | PFAM: PUA domain containing protein; KEGG: mmp:MMP0055 PUA domain protein. (159 aa) |
| | rpl18a | PFAM: Ribosomal LX protein; KEGG: mmp:MMP0060 ribosomal LX protein. (76 aa) |
| | rpl31e | PFAM: Ribosomal protein L31e; KEGG: mmp:MMP0062 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family. (83 aa) |
| | priS | Putative DNA primase, small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer s [...] (355 aa) |
| | ABR54999.1 | TIGRFAM: 3-hydroxy-3-methylglutaryl Coenzyme A reductase; PFAM: hydroxymethylglutaryl-coenzyme A reductase; KEGG: mmp:MMP0087 hydroxymethylglutaryl-coenzyme A reductase:3-hydroxy-3-methylglutaryl coenzyme A reductase; Belongs to the HMG-CoA reductase family. (411 aa) |
| | hemA | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (379 aa) |
| | rpl21e | PFAM: Ribosomal protein L21e; KEGG: mmp:MMP0093 ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. (97 aa) |
| | pus10 | THUMP domain protein; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. (474 aa) |
| | ABR55027.1 | KEGG: mmp:MMP0122 hypothetical protein. (298 aa) |
| | ABR55045.1 | PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: mmp:MMP0141 hypothetical protein. (309 aa) |
| | ABR55048.1 | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mja:MJ1656 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HpcE). (202 aa) |
| | nifH-2 | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (292 aa) |
| | rpl40e | KEGG: mmp:MMP0151 LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family. (47 aa) |
| | rps19e | Ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (141 aa) |
| | rpl39e | PFAM: Ribosomal protein L39e; KEGG: mmp:MMP0159 LSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. (51 aa) |
| | ABR55066.1 | TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: mmp:MMP0163 putative arsenical pump-driving ATPase. (345 aa) |
| | cbiX | Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2+) into sirohydrochlorin to yield Ni- sirohydrochlorin. (150 aa) |
| | ABR55076.1 | TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mmp:MMP0174 HD phosphohydrolase family member. (458 aa) |
| | ABR55078.1 | AAA family ATPase, CDC48 subfamily; KEGG: mmp:MMP0176 CDC48 cell division cycle protein family member; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; SMART: AAA ATPase. (781 aa) |
| | ABR55103.1 | PFAM: Protein of unknown function UPF0113; KEGG: mmp:MMP0016 hypothetical protein. (163 aa) |
| | priL | DNA primase, large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. (369 aa) |
| | trm1 | N2,N2-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (389 aa) |
| | ABR55157.1 | Brix; Probably involved in the biogenesis of the ribosome. (163 aa) |
| | rpl37ae | TIGRFAM: ribosomal protein L37a; PFAM: Ribosomal L37ae protein; KEGG: mmp:MMP0249 large subunit ribosomal protein L37Ae. (96 aa) |
| | ABR55160.1 | PFAM: Shwachman-Bodian-Diamond syndrome proteins; KEGG: mmp:MMP0250 hypothetical protein. (234 aa) |
| | tbp | TATA-box binding; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. (181 aa) |
| | rpl12 | Ribosomal protein 60S; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (99 aa) |
| | rpl10 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (336 aa) |
| | rpl1 | Ribosomal protein L1; Probably involved in E site tRNA release (By similarity). Binds directly to 23S rRNA. (213 aa) |
| | ABR55177.1 | PFAM: tRNA pseudouridine synthase; KEGG: mmp:MMP0268 tRNA pseudouridine synthase related. (265 aa) |
| | ABR55186.1 | Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP0278 hypothetical protein. (153 aa) |
| | nac | alpha-NAC related protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. (125 aa) |
| | rpl15e | PFAM: Ribosomal protein L15e; KEGG: mmp:MMP0298 LSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. (219 aa) |
| | rfcL | AAA ATPase central domain protein; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. (492 aa) |
| | ABR55248.1 | TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mmp:MMP0341 pyruvate carboxylase subunit A. (506 aa) |
| | ABR55250.1 | TIGRFAM: putative ATP binding protein; PFAM: protein of unknown function DUF71 ATP-binding region; KEGG: mmp:MMP0343 hypothetical protein. (222 aa) |
| | ABR55264.1 | TIGRFAM: DNA polymerase Pol2; PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mmp:MMP0380 DNA polymerase family B. (810 aa) |
| | ABR55266.1 | ABC transporter related; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; ABC transporter related; Possible metal-binding region in RNase L inhibitor, RLI; SMART: AAA ATPase; KEGG: mmp:MMP0382 RNase L inhibitor. (590 aa) |
| | ABR55270.1 | PFAM: Transcription factor CBF/NF-Y/archaeal histone; Histone core; KEGG: mmp:MMP0386 archaeal histone A. (67 aa) |
| | ABR55275.1 | Serine--pyruvate transaminase; PFAM: aminotransferase class V; KEGG: mmp:MMP0391 aspartate aminotransferase. (382 aa) |
| | ABR54001.1 | Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: shm:Shewmr7_3695 hypothetical protein. (1622 aa) |
| | ABR54007.1 | 2-alkenal reductase; PFAM: Heat shock protein 70; KEGG: cpr:CPR_0238 DnaK family protein. (573 aa) |
| | ABR54036.1 | SMART: von Willebrand factor type A; KEGG: pis:Pisl_0229 magnesium chelatase. (272 aa) |
| | ABR54037.1 | PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; KEGG: pis:Pisl_0229 magnesium chelatase. (356 aa) |
| | ABR54054.1 | PFAM: iron-containing alcohol dehydrogenase; KEGG: mhu:Mhun_0171 iron-containing alcohol dehydrogenase. (387 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (817 aa) |
| | ABR54072.1 | Hypothetical protein. (164 aa) |
| | gatB | glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (469 aa) |
| | ABR54159.1 | TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily (subfamily IA) hydrolase, TIGR02253; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmp:MMP0939 hypothetical protein. (225 aa) |
| | ABR54198.1 | TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mmp:MMP0966 uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (239 aa) |
| | ABR54221.1 | Protein of unknown function DUF166; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Protein of unknown function DUF166; KEGG: mmp:MMP0986 thymidylate synthase. (290 aa) |
| | top6B | DNA topoisomerase VI, B subunit; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. (666 aa) |
| | ABR54248.1 | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mmp:MMP1012 exonuclease III. (257 aa) |
| | ABR54252.1 | PFAM: Transcription factor CBF/NF-Y/archaeal histone; KEGG: mmp:MMP1015 transcription factor CBF/NF-Y/archaeal histone:histone-fold/TFIID-TAF/NF-Y domain. (99 aa) |
| | ABR54254.1 | Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP1016 hypothetical protein. (411 aa) |
| | ABR54264.1 | PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mmp:MMP1032 replication protein A. (641 aa) |
