13 items (Seriola dumerili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	map3k7	Mitogen-activated protein kinase kinase kinase 7. (602 aa)
	ubb	Uncharacterized protein. (153 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	irak1	Interleukin-1 receptor-associated kinase 1. (738 aa)
	ubc	Uncharacterized protein. (748 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (571 aa)
	LOC111228953	Protein kinase domain-containing protein. (351 aa)
	map3k20	Uncharacterized protein. (806 aa)
	ENSSDUP00000029748	Protein kinase domain-containing protein. (123 aa)
	tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1. (513 aa)
	tab2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (758 aa)
	tab3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (618 aa)

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000029748	irak1	ENSSDUP00000029748	ENSSDUP00000027344	Protein kinase domain-containing protein.	Interleukin-1 receptor-associated kinase 1.	0.972
ENSSDUP00000029748	map3k7	ENSSDUP00000029748	ENSSDUP00000012768	Protein kinase domain-containing protein.	Mitogen-activated protein kinase kinase kinase 7.	0.900
ENSSDUP00000029748	rps27a	ENSSDUP00000029748	ENSSDUP00000004225	Protein kinase domain-containing protein.	Ribosomal protein S27a.	0.595
ENSSDUP00000029748	tab1	ENSSDUP00000029748	ENSSDUP00000016265	Protein kinase domain-containing protein.	TGF-beta activated kinase 1/MAP3K7 binding protein 1.	0.997
ENSSDUP00000029748	tab2	ENSSDUP00000029748	ENSSDUP00000014446	Protein kinase domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.982
ENSSDUP00000029748	tab3	ENSSDUP00000029748	ENSSDUP00000003546	Protein kinase domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.996
ENSSDUP00000029748	traf6	ENSSDUP00000029748	ENSSDUP00000021100	Protein kinase domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.997
ENSSDUP00000029748	ubb	ENSSDUP00000029748	ENSSDUP00000009754	Protein kinase domain-containing protein.	Uncharacterized protein.	0.554
ENSSDUP00000029748	ubc	ENSSDUP00000029748	ENSSDUP00000023286	Protein kinase domain-containing protein.	Uncharacterized protein.	0.554
LOC111228953	irak1	ENSSDUP00000019702	ENSSDUP00000027344	Protein kinase domain-containing protein.	Interleukin-1 receptor-associated kinase 1.	0.628
LOC111228953	map3k20	ENSSDUP00000019702	ENSSDUP00000029705	Protein kinase domain-containing protein.	Uncharacterized protein.	0.901
LOC111228953	rps27a	ENSSDUP00000019702	ENSSDUP00000004225	Protein kinase domain-containing protein.	Ribosomal protein S27a.	0.567
LOC111228953	tab1	ENSSDUP00000019702	ENSSDUP00000016265	Protein kinase domain-containing protein.	TGF-beta activated kinase 1/MAP3K7 binding protein 1.	0.927
LOC111228953	tab2	ENSSDUP00000019702	ENSSDUP00000014446	Protein kinase domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.815
LOC111228953	tab3	ENSSDUP00000019702	ENSSDUP00000003546	Protein kinase domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.819
LOC111228953	traf6	ENSSDUP00000019702	ENSSDUP00000021100	Protein kinase domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.924
LOC111228953	ubb	ENSSDUP00000019702	ENSSDUP00000009754	Protein kinase domain-containing protein.	Uncharacterized protein.	0.541
LOC111228953	ubc	ENSSDUP00000019702	ENSSDUP00000023286	Protein kinase domain-containing protein.	Uncharacterized protein.	0.541
irak1	ENSSDUP00000029748	ENSSDUP00000027344	ENSSDUP00000029748	Interleukin-1 receptor-associated kinase 1.	Protein kinase domain-containing protein.	0.972
irak1	LOC111228953	ENSSDUP00000027344	ENSSDUP00000019702	Interleukin-1 receptor-associated kinase 1.	Protein kinase domain-containing protein.	0.628