(6 nodes) Transcription factor TFIID complex network (Oryza glaberrima)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1NNI4_ORYGL	TAF domain-containing protein. (541 aa)
	I1NQN4_ORYGL	TAFII28 domain-containing protein. (211 aa)
	I1Q430_ORYGL	Uncharacterized protein. (1823 aa)
	I1Q450_ORYGL	WD_REPEATS_REGION domain-containing protein. (666 aa)
	I1QNW5_ORYGL	Uncharacterized protein. (1527 aa)
	I1QP59_ORYGL	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (165 aa)

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NNI4_ORYGL	I1NQN4_ORYGL	I1NNI4	I1NQN4	TAF domain-containing protein.	TAFII28 domain-containing protein.	0.999
I1NNI4_ORYGL	I1Q430_ORYGL	I1NNI4	I1Q430	TAF domain-containing protein.	Uncharacterized protein.	0.999
I1NNI4_ORYGL	I1Q450_ORYGL	I1NNI4	I1Q450	TAF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
I1NNI4_ORYGL	I1QNW5_ORYGL	I1NNI4	I1QNW5	TAF domain-containing protein.	Uncharacterized protein.	0.999
I1NNI4_ORYGL	I1QP59_ORYGL	I1NNI4	I1QP59	TAF domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999
I1NQN4_ORYGL	I1NNI4_ORYGL	I1NQN4	I1NNI4	TAFII28 domain-containing protein.	TAF domain-containing protein.	0.999
I1NQN4_ORYGL	I1Q430_ORYGL	I1NQN4	I1Q430	TAFII28 domain-containing protein.	Uncharacterized protein.	0.999
I1NQN4_ORYGL	I1Q450_ORYGL	I1NQN4	I1Q450	TAFII28 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
I1NQN4_ORYGL	I1QNW5_ORYGL	I1NQN4	I1QNW5	TAFII28 domain-containing protein.	Uncharacterized protein.	0.999
I1NQN4_ORYGL	I1QP59_ORYGL	I1NQN4	I1QP59	TAFII28 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999
I1Q430_ORYGL	I1NNI4_ORYGL	I1Q430	I1NNI4	Uncharacterized protein.	TAF domain-containing protein.	0.999
I1Q430_ORYGL	I1NQN4_ORYGL	I1Q430	I1NQN4	Uncharacterized protein.	TAFII28 domain-containing protein.	0.999
I1Q430_ORYGL	I1Q450_ORYGL	I1Q430	I1Q450	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
I1Q430_ORYGL	I1QNW5_ORYGL	I1Q430	I1QNW5	Uncharacterized protein.	Uncharacterized protein.	0.999
I1Q430_ORYGL	I1QP59_ORYGL	I1Q430	I1QP59	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999
I1Q450_ORYGL	I1NNI4_ORYGL	I1Q450	I1NNI4	WD_REPEATS_REGION domain-containing protein.	TAF domain-containing protein.	0.999
I1Q450_ORYGL	I1NQN4_ORYGL	I1Q450	I1NQN4	WD_REPEATS_REGION domain-containing protein.	TAFII28 domain-containing protein.	0.999
I1Q450_ORYGL	I1Q430_ORYGL	I1Q450	I1Q430	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
I1Q450_ORYGL	I1QNW5_ORYGL	I1Q450	I1QNW5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
I1Q450_ORYGL	I1QP59_ORYGL	I1Q450	I1QP59	WD_REPEATS_REGION domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999