STRINGSTRING
ALC62_12156 ALC62_12156 ALC62_09947 ALC62_09947 ALC62_06857 ALC62_06857 ALC62_05241 ALC62_05241 ALC62_01832 ALC62_01832 ALC62_10597 ALC62_10597 ALC62_05497 ALC62_05497 ALC62_04755 ALC62_04755 ALC62_03658 ALC62_03658 ALC62_03413 ALC62_03413
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC62_12156Splicing factor 3B subunit 3. (1217 aa)
ALC62_09947Splicing factor 3A subunit 2. (273 aa)
ALC62_06857Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
ALC62_05241PHD finger-like domain-containing protein 5A. (110 aa)
ALC62_01832Pre-mRNA branch site p14-like protein. (114 aa)
ALC62_10597Putative ATP-dependent RNA helicase DDX46. (871 aa)
ALC62_05497Splicing factor 3B subunit 2. (676 aa)
ALC62_04755Splicing factor 3B subunit 4. (410 aa)
ALC62_03658Splicing factor 3B subunit 1. (1303 aa)
ALC62_03413Splicing factor 3A subunit 1. (769 aa)
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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