STRINGSTRING
SMF46666.1 SMF46666.1 SMF49275.1 SMF49275.1 SMF68649.1 SMF68649.1 SMF71865.1 SMF71865.1 SMF74624.1 SMF74624.1 SMF19447.1 SMF19447.1 SME96731.1 SME96731.1 SMF58328.1 SMF58328.1 SMF44336.1 SMF44336.1 SMF46192.1 SMF46192.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMF46666.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (970 aa)
SMF49275.1Two-component system, cell cycle sensor histidine kinase PleC. (781 aa)
SMF68649.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (863 aa)
SMF71865.1PAS domain S-box-containing protein. (974 aa)
SMF74624.1PAS fold-containing protein. (153 aa)
SMF19447.1PAS domain S-box-containing protein. (315 aa)
SME96731.1Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. (585 aa)
SMF58328.1PAS domain S-box-containing protein. (684 aa)
SMF44336.1PAS fold-containing protein. (145 aa)
SMF46192.1Diguanylate cyclase (GGDEF) domain-containing protein. (1052 aa)
Your Current Organism:
Rhizobium oryzae
NCBI taxonomy Id: 464029
Other names: Allorhizobium oryzae, Allorhizobium oryzae (Peng et al. 2008) Mousavi et al. 2016, CGMCC 1.7048, HAMBI 3197, LMG 24253, LMG:24253, R. oryzae, Rhizobium oryzae Peng et al. 2008, strain Alt 505
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