(11 nodes) Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead, and [2Fe-2S]-binding network (Sphingobium sp. YBL2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR22916.1	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)
	AJR22917.1	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
	AJR26140.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	AJR23393.1	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	AJR23394.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)
	AJR24171.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AJR26326.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
	AJR24187.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
	AJR24267.1	Isoquinoline 1-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
	AJR26366.1	XshC-Cox1-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
	AJR24629.1	Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (740 aa)

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22916.1	AJR22917.1	TZ53_03190	TZ53_03195	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22916.1	AJR23393.1	TZ53_03190	TZ53_06225	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AJR22916.1	AJR23394.1	TZ53_03190	TZ53_06230	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AJR22916.1	AJR24171.1	TZ53_03190	TZ53_10970	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AJR22916.1	AJR24267.1	TZ53_03190	TZ53_11565	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isoquinoline 1-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AJR22916.1	AJR26140.1	TZ53_03190	TZ53_03200	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22916.1	AJR26326.1	TZ53_03190	TZ53_11065	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AJR22916.1	AJR26366.1	TZ53_03190	TZ53_12770	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XshC-Cox1-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
AJR22917.1	AJR22916.1	TZ53_03195	TZ53_03190	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22917.1	AJR23393.1	TZ53_03195	TZ53_06225	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AJR22917.1	AJR23394.1	TZ53_03195	TZ53_06230	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJR22917.1	AJR24171.1	TZ53_03195	TZ53_10970	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.582
AJR22917.1	AJR24187.1	TZ53_03195	TZ53_11075	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AJR22917.1	AJR24267.1	TZ53_03195	TZ53_11565	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Isoquinoline 1-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
AJR22917.1	AJR24629.1	TZ53_03195	TZ53_13730	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AJR22917.1	AJR26140.1	TZ53_03195	TZ53_03200	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22917.1	AJR26326.1	TZ53_03195	TZ53_11065	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
AJR22917.1	AJR26366.1	TZ53_03195	TZ53_12770	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XshC-Cox1-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
AJR23393.1	AJR22916.1	TZ53_06225	TZ53_03190	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AJR23393.1	AJR22917.1	TZ53_06225	TZ53_03195	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904