47 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fbxo38	F-box protein 38. (896 aa)
	LOC106922246	Uncharacterized protein. (275 aa)
	ENSPMEP00000000214	Uncharacterized protein. (267 aa)
	ENSPMEP00000000216	Uncharacterized protein. (280 aa)
	fbxl5	F-box and leucine-rich repeat protein 5. (698 aa)
	fbxo42	F-box protein 42. (700 aa)
	fbxw4	F-box and WD repeat domain containing 4. (420 aa)
	fbxl4	F-box and leucine-rich repeat protein 4. (613 aa)
	cul1	Cullin 1b; Belongs to the cullin family. (776 aa)
	gse1	Gse1 coiled-coil protein. (919 aa)
	fbxo31	F-box protein 31. (585 aa)
	ccnf	Cyclin F; Belongs to the cyclin family. (784 aa)
	cul2	Cullin 2; Belongs to the cullin family. (745 aa)
	LOC106925043	Zgc:175088. (175 aa)
	fbxl15	F-box and leucine-rich repeat protein 15. (292 aa)
	dmac2	Si:ch1073-228b5.2. (293 aa)
	fbxo33	F-box protein 33. (495 aa)
	fbxo48	F-box protein 48. (153 aa)
	LOC106933445	Leucine rich repeat containing 29. (654 aa)
	cul4a	Cullin 4A; Belongs to the cullin family. (646 aa)
	fbxl22	F-box and leucine-rich repeat protein 22. (228 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	fbxw5	F-box and WD repeat domain containing 5. (630 aa)
	LOC106928568	Si:ch73-290k24.5. (798 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	fbxo9	F-box protein 9. (421 aa)
	fbxl14	F-box and leucine-rich repeat protein 14a. (403 aa)
	LOC106905488	Uncharacterized protein. (425 aa)
	fbxl6	F-box domain-containing protein. (559 aa)
	LOC106922245	Uncharacterized protein. (275 aa)
	FBXL14	F-box and leucine rich repeat protein 14. (415 aa)
	fbxo4	F-box protein 4. (391 aa)
	ENSPMEP00000022248	F-box domain-containing protein. (71 aa)
	LOC106932942	F-box domain-containing protein. (409 aa)
	skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (404 aa)
	fbxw11	F-box and WD repeat domain containing 11b. (527 aa)
	LOC106926359	F-box domain-containing protein. (797 aa)
	fbxl7	Si:dkey-192l18.9. (493 aa)
	fbxl17	F-box and leucine-rich repeat protein 17. (438 aa)
	fbxl20	F-box and leucine-rich repeat protein 20. (436 aa)
	fbxl2	F-box and leucine-rich repeat protein 2. (442 aa)
	nccrp1	Non-specific cytotoxic cell receptor protein 1. (233 aa)
	fbxo41	F-box protein 41. (833 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1621 aa)
	fbxl18	F-box and leucine-rich repeat protein 18. (738 aa)
	fbxl16	F-box and leucine-rich repeat protein 16. (505 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (868 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000000214	ENSPMEP00000000216	ENSPMEP00000000214	ENSPMEP00000000216	Uncharacterized protein.	Uncharacterized protein.	0.885
ENSPMEP00000000214	LOC106925043	ENSPMEP00000000214	ENSPMEP00000006028	Uncharacterized protein.	Zgc:175088.	0.679
ENSPMEP00000000214	cul1	ENSPMEP00000000214	ENSPMEP00000004669	Uncharacterized protein.	Cullin 1b; Belongs to the cullin family.	0.811
ENSPMEP00000000214	fbxo4	ENSPMEP00000000214	ENSPMEP00000021734	Uncharacterized protein.	F-box protein 4.	0.708
ENSPMEP00000000214	fbxw11	ENSPMEP00000000214	ENSPMEP00000023763	Uncharacterized protein.	F-box and WD repeat domain containing 11b.	0.669
ENSPMEP00000000214	rbx1	ENSPMEP00000000214	ENSPMEP00000015315	Uncharacterized protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.689
ENSPMEP00000000214	skp1	ENSPMEP00000000214	ENSPMEP00000014329	Uncharacterized protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.911
ENSPMEP00000000214	skp2	ENSPMEP00000000214	ENSPMEP00000023258	Uncharacterized protein.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.690
ENSPMEP00000000216	ENSPMEP00000000214	ENSPMEP00000000216	ENSPMEP00000000214	Uncharacterized protein.	Uncharacterized protein.	0.885
ENSPMEP00000000216	LOC106922245	ENSPMEP00000000216	ENSPMEP00000021037	Uncharacterized protein.	Uncharacterized protein.	0.893
ENSPMEP00000000216	LOC106922246	ENSPMEP00000000216	ENSPMEP00000000212	Uncharacterized protein.	Uncharacterized protein.	0.885
ENSPMEP00000000216	LOC106925043	ENSPMEP00000000216	ENSPMEP00000006028	Uncharacterized protein.	Zgc:175088.	0.756
ENSPMEP00000000216	cul1	ENSPMEP00000000216	ENSPMEP00000004669	Uncharacterized protein.	Cullin 1b; Belongs to the cullin family.	0.811
ENSPMEP00000000216	fbxo4	ENSPMEP00000000216	ENSPMEP00000021734	Uncharacterized protein.	F-box protein 4.	0.708
ENSPMEP00000000216	fbxw11	ENSPMEP00000000216	ENSPMEP00000023763	Uncharacterized protein.	F-box and WD repeat domain containing 11b.	0.669
ENSPMEP00000000216	rbx1	ENSPMEP00000000216	ENSPMEP00000015315	Uncharacterized protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.689
ENSPMEP00000000216	skp1	ENSPMEP00000000216	ENSPMEP00000014329	Uncharacterized protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.911
ENSPMEP00000000216	skp2	ENSPMEP00000000216	ENSPMEP00000023258	Uncharacterized protein.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.690
ENSPMEP00000022248	cul1	ENSPMEP00000022248	ENSPMEP00000004669	F-box domain-containing protein.	Cullin 1b; Belongs to the cullin family.	0.672
ENSPMEP00000022248	fbxw11	ENSPMEP00000022248	ENSPMEP00000023763	F-box domain-containing protein.	F-box and WD repeat domain containing 11b.	0.499