STRINGSTRING
TARUN_3642 TARUN_3642 TARUN_9967 TARUN_9967 TARUN_7769 TARUN_7769 TARUN_551 TARUN_551
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TARUN_3642Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (383 aa)
TARUN_9967Transketolase. (690 aa)
TARUN_77693-methyl-2-oxobutanoate dehydrogenase lipoamidee1 beta chain. (400 aa)
TARUN_551Transketolase. (693 aa)
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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