(5 nodes) Mixed, incl. Protein of unknown function DUF4666, and Uncharacterized protein At5g23160-like network (Nicotiana attenuata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NDR1_0	Protein ndr1. (201 aa)
	A4A49_32266	Uncharacterized protein. (130 aa)
	A4A49_41286	VQ domain-containing protein. (287 aa)
	A4A49_20424	Uncharacterized protein. (301 aa)
	A4A49_58875	Putative ribonuclease h protein. (212 aa)

Your Current Organism:

Nicotiana attenuata

NCBI taxonomy Id: 49451
Other names: N. attenuata, Nicotiana attenuata Torr. ex S.Watson

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4A49_20424	A4A49_32266	A0A314KIN9	A0A1J6JZ70	Uncharacterized protein.	Uncharacterized protein.	0.408
A4A49_20424	A4A49_41286	A0A314KIN9	A0A1J6K2T3	Uncharacterized protein.	VQ domain-containing protein.	0.457
A4A49_20424	NDR1_0	A0A314KIN9	A0A1J6HYK3	Uncharacterized protein.	Protein ndr1.	0.523
A4A49_32266	A4A49_20424	A0A1J6JZ70	A0A314KIN9	Uncharacterized protein.	Uncharacterized protein.	0.408
A4A49_32266	A4A49_41286	A0A1J6JZ70	A0A1J6K2T3	Uncharacterized protein.	VQ domain-containing protein.	0.464
A4A49_32266	A4A49_58875	A0A1J6JZ70	A0A314L4A1	Uncharacterized protein.	Putative ribonuclease h protein.	0.496
A4A49_32266	NDR1_0	A0A1J6JZ70	A0A1J6HYK3	Uncharacterized protein.	Protein ndr1.	0.479
A4A49_41286	A4A49_20424	A0A1J6K2T3	A0A314KIN9	VQ domain-containing protein.	Uncharacterized protein.	0.457
A4A49_41286	A4A49_32266	A0A1J6K2T3	A0A1J6JZ70	VQ domain-containing protein.	Uncharacterized protein.	0.464
A4A49_41286	NDR1_0	A0A1J6K2T3	A0A1J6HYK3	VQ domain-containing protein.	Protein ndr1.	0.470
A4A49_58875	A4A49_32266	A0A314L4A1	A0A1J6JZ70	Putative ribonuclease h protein.	Uncharacterized protein.	0.496
NDR1_0	A4A49_20424	A0A1J6HYK3	A0A314KIN9	Protein ndr1.	Uncharacterized protein.	0.523
NDR1_0	A4A49_32266	A0A1J6HYK3	A0A1J6JZ70	Protein ndr1.	Uncharacterized protein.	0.479
NDR1_0	A4A49_41286	A0A1J6HYK3	A0A1J6K2T3	Protein ndr1.	VQ domain-containing protein.	0.470