| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| intR | yecE | b1345 | b1868 | Rac prophage; Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome (By similarity). | UPF0759 family protein; Belongs to the UPF0759 family. | 0.750 |
| mlrA | wrbA | b2127 | b1004 | Transcriptional activator of csgD and csgBA; Activates transcription of csgD, the master regulator of biofilm formation, by binding to its promoter region. Also controls the transcription of cadC and ibaG. Part of a signaling cascade that regulates curli biosynthesis. The cascade is composed of two c-di-GMP control modules, in which c-di-GMP controlled by the DgcE/PdeH pair (module I) regulates the activity of the DgcM/PdeR pair (module II), which in turn regulates activity of the transcription factor MlrA. | NAD(P)H:quinone oxidoreductase; It seems to function in response to environmental stress when various electron transfer chains are affected or when the environment is highly oxidizing. It reduces quinones to the hydroquinone state to prevent interaction of the semiquinone with O2 and production of superoxide. It prefers NADH over NADPH. | 0.907 |
| mlrA | yecE | b2127 | b1868 | Transcriptional activator of csgD and csgBA; Activates transcription of csgD, the master regulator of biofilm formation, by binding to its promoter region. Also controls the transcription of cadC and ibaG. Part of a signaling cascade that regulates curli biosynthesis. The cascade is composed of two c-di-GMP control modules, in which c-di-GMP controlled by the DgcE/PdeH pair (module I) regulates the activity of the DgcM/PdeR pair (module II), which in turn regulates activity of the transcription factor MlrA. | UPF0759 family protein; Belongs to the UPF0759 family. | 0.916 |
| ompW | yecE | b1256 | b1868 | Outer membrane protein W; Acts as a receptor for colicin S4. | UPF0759 family protein; Belongs to the UPF0759 family. | 0.667 |
| prfC | yecE | b4375 | b1868 | Peptide chain release factor RF-3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. | UPF0759 family protein; Belongs to the UPF0759 family. | 0.649 |
| rhaA | rhaB | b3903 | b3904 | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | 0.999 |
| rhaA | rhaM | b3903 | b3901 | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.998 |
| rhaA | rhaR | b3903 | b3906 | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.936 |
| rhaA | rhaS | b3903 | b3905 | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | 0.787 |
| rhaA | rhaT | b3903 | b3907 | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | 0.929 |
| rhaB | rhaA | b3904 | b3903 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | 0.999 |
| rhaB | rhaM | b3904 | b3901 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.977 |
| rhaB | rhaR | b3904 | b3906 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.975 |
| rhaB | rhaS | b3904 | b3905 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | 0.891 |
| rhaB | rhaT | b3904 | b3907 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | 0.942 |
| rhaM | rhaA | b3901 | b3903 | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | L-rhamnose isomerase; Protein involved in carbohydrate catabolic process. | 0.998 |
| rhaM | rhaB | b3901 | b3904 | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). It could also play a role in the metabolism of some rare sugars such as L-fructose. Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1- phosphate. Uridine triphosphate (UTP), cytidine 5-triphosphate (CTP), guanosine 5-triphosphate (GTP), and thymidine triphosphate (TTP) also can act as phosphoryl donors. It can also phosphorylate L-fuculose and L-xylulose. Belongs to the rhamnulokinase family. | 0.977 |
| rhaM | rhaR | b3901 | b3906 | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.585 |
| rhaM | rhaS | b3901 | b3905 | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | Transcriptional activator of rhaBAD and rhaT; Activates expression of the rhaBAD and rhaT operons. | 0.463 |
| rhaM | rhaT | b3901 | b3907 | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | L-rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Can also transport L-mannose and L-xylose, but at reduced rates. | 0.862 |