31 items (Ciona savignyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2Y6D9_CIOSA	Uncharacterized protein. (187 aa)
	H2Y577_CIOSA	Uncharacterized protein. (844 aa)
	H2ZEV1_CIOSA	Uncharacterized protein. (421 aa)
	H2ZD39_CIOSA	PID domain-containing protein. (205 aa)
	H2ZB10_CIOSA	Uncharacterized protein. (316 aa)
	H2ZA94_CIOSA	Uncharacterized protein. (524 aa)
	H2Z9N6_CIOSA	Uncharacterized protein. (337 aa)
	H2Z393_CIOSA	Uncharacterized protein. (1889 aa)
	H2Z223_CIOSA	Uncharacterized protein. (265 aa)
	H2Z0R8_CIOSA	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	H2Z0K9_CIOSA	OBG-type G domain-containing protein. (367 aa)
	H2Z0I5_CIOSA	Olfactomedin-like domain-containing protein. (247 aa)
	H2Z059_CIOSA	WH2 domain-containing protein. (497 aa)
	H2YU50_CIOSA	Protein kinase domain-containing protein. (251 aa)
	H2YP52_CIOSA	ANK_REP_REGION domain-containing protein. (139 aa)
	H2YMG1_CIOSA	Uncharacterized protein. (640 aa)
	H2YKJ1_CIOSA	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (257 aa)
	H2YER6_CIOSA	Uncharacterized protein. (420 aa)
	H2YEQ7_CIOSA	Uncharacterized protein. (257 aa)
	H2YD13_CIOSA	Tyrosine-protein kinase. (807 aa)
	H2Y9G7_CIOSA	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2479 aa)
	H2Y7D2_CIOSA	Uncharacterized protein. (385 aa)
	H2Y6E0_CIOSA	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	H2Y5D5_CIOSA	WD_REPEATS_REGION domain-containing protein. (459 aa)
	H2ZPK3_CIOSA	Uncharacterized protein. (106 aa)
	H2ZNY2_CIOSA	Uncharacterized protein. (1139 aa)
	H2ZN57_CIOSA	FERM domain-containing protein. (548 aa)
	H2ZLE2_CIOSA	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (167 aa)
	H2ZLE0_CIOSA	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (167 aa)
	H2ZFI9_CIOSA	CRIB domain-containing protein. (284 aa)
	H2ZFH8_CIOSA	Uncharacterized protein. (528 aa)

Your Current Organism:

Ciona savignyi

NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2Y577_CIOSA	H2Y9G7_CIOSA	ENSCSAVP00000000475	ENSCSAVP00000001965	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.998
H2Y5D5_CIOSA	H2ZLE0_CIOSA	ENSCSAVP00000000533	ENSCSAVP00000018406	WD_REPEATS_REGION domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.721
H2Y5D5_CIOSA	H2ZLE2_CIOSA	ENSCSAVP00000000533	ENSCSAVP00000018408	WD_REPEATS_REGION domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.721
H2Y6D9_CIOSA	H2YEQ7_CIOSA	ENSCSAVP00000000887	ENSCSAVP00000003805	Uncharacterized protein.	Uncharacterized protein.	0.629
H2Y6D9_CIOSA	H2YER6_CIOSA	ENSCSAVP00000000887	ENSCSAVP00000003814	Uncharacterized protein.	Uncharacterized protein.	0.629
H2Y6E0_CIOSA	H2Z0R8_CIOSA	ENSCSAVP00000000888	ENSCSAVP00000011180	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.790
H2Y7D2_CIOSA	H2YD13_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000003211	Uncharacterized protein.	Tyrosine-protein kinase.	0.512
H2Y7D2_CIOSA	H2YP52_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000007110	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.536
H2Y7D2_CIOSA	H2YU50_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000008860	Uncharacterized protein.	Protein kinase domain-containing protein.	0.504
H2Y7D2_CIOSA	H2Z059_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000010971	Uncharacterized protein.	WH2 domain-containing protein.	0.795
H2Y7D2_CIOSA	H2Z0R8_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000011180	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.516
H2Y7D2_CIOSA	H2ZFH8_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000016344	Uncharacterized protein.	Uncharacterized protein.	0.929
H2Y7D2_CIOSA	H2ZNY2_CIOSA	ENSCSAVP00000001230	ENSCSAVP00000019298	Uncharacterized protein.	Uncharacterized protein.	0.821
H2Y9G7_CIOSA	H2Y577_CIOSA	ENSCSAVP00000001965	ENSCSAVP00000000475	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.998
H2Y9G7_CIOSA	H2YD13_CIOSA	ENSCSAVP00000001965	ENSCSAVP00000003211	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Tyrosine-protein kinase.	0.431
H2Y9G7_CIOSA	H2YEQ7_CIOSA	ENSCSAVP00000001965	ENSCSAVP00000003805	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.881
H2Y9G7_CIOSA	H2YER6_CIOSA	ENSCSAVP00000001965	ENSCSAVP00000003814	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.881
H2Y9G7_CIOSA	H2YU50_CIOSA	ENSCSAVP00000001965	ENSCSAVP00000008860	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Protein kinase domain-containing protein.	0.436
H2Y9G7_CIOSA	H2Z0R8_CIOSA	ENSCSAVP00000001965	ENSCSAVP00000011180	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.604
H2YD13_CIOSA	H2Y7D2_CIOSA	ENSCSAVP00000003211	ENSCSAVP00000001230	Tyrosine-protein kinase.	Uncharacterized protein.	0.512