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ALC53_09781 ALC53_09781 ALC53_09571 ALC53_09571 ALC53_09194 ALC53_09194 ALC53_09068 ALC53_09068 ALC53_09419 ALC53_09419 ALC53_07780 ALC53_07780 ALC53_07873 ALC53_07873 ALC53_07709 ALC53_07709 ALC53_07294 ALC53_07294 ALC53_07489 ALC53_07489 ALC53_06927 ALC53_06927 ALC53_07492 ALC53_07492 ALC53_07100 ALC53_07100 ALC53_06849 ALC53_06849 ALC53_06582 ALC53_06582 ALC53_06084 ALC53_06084 ALC53_06200 ALC53_06200 ALC53_05970 ALC53_05970 ALC53_05810 ALC53_05810 ALC53_05968 ALC53_05968 ALC53_06003 ALC53_06003 ALC53_06015 ALC53_06015 LSM4 LSM4 ALC53_05240 ALC53_05240 ALC53_10463 ALC53_10463 ALC53_04851 ALC53_04851 ALC53_04866 ALC53_04866 ALC53_04868 ALC53_04868 ALC53_04956 ALC53_04956 ALC53_04943 ALC53_04943 ALC53_04667 ALC53_04667 ALC53_04201 ALC53_04201 ALC53_03336 ALC53_03336 ALC53_03349 ALC53_03349 ALC53_03858 ALC53_03858 ALC53_03229 ALC53_03229 ALC53_03478 ALC53_03478 ALC53_02710 ALC53_02710 ALC53_02886 ALC53_02886 EIF6 EIF6 ALC53_02954 ALC53_02954 ALC53_02680 ALC53_02680 ALC53_02217 ALC53_02217 ALC53_02110 ALC53_02110 ALC53_02337 ALC53_02337 ALC53_01635 ALC53_01635 ALC53_01633 ALC53_01633 ALC53_02051 ALC53_02051 ALC53_01517 ALC53_01517 ALC53_02193 ALC53_02193 ALC53_01175 ALC53_01175 ALC53_00837 ALC53_00837 ALC53_01629 ALC53_01629 ALC53_00942 ALC53_00942 ALC53_01478 ALC53_01478 ALC53_01412 ALC53_01412 ALC53_00760 ALC53_00760 ALC53_00966 ALC53_00966 ALC53_00617 ALC53_00617 ALC53_00261 ALC53_00261 ALC53_01083 ALC53_01083 ALC53_00653 ALC53_00653 ALC53_00421 ALC53_00421 ALC53_00091 ALC53_00091 ALC53_04850 ALC53_04850 ALC53_10699 ALC53_10699 ALC53_10679 ALC53_10679 ALC53_10472 ALC53_10472 ALC53_14045 ALC53_14045 ALC53_06565 ALC53_06565 ALC53_12874 ALC53_12874 ALC53_12847 ALC53_12847 ALC53_11423 ALC53_11423 ALC53_08961 ALC53_08961 ALC53_08934 ALC53_08934 ALC53_08938 ALC53_08938 ALC53_08960 ALC53_08960 ALC53_08937 ALC53_08937 ALC53_09168 ALC53_09168 ALC53_08089 ALC53_08089 ALC53_08962 ALC53_08962 ALC53_07348 ALC53_07348 ALC53_06704 ALC53_06704 ALC53_06712 ALC53_06712 ALC53_06742 ALC53_06742 ALC53_06741 ALC53_06741 ALC53_05614 ALC53_05614 ALC53_05099 ALC53_05099 ALC53_03734 ALC53_03734 ALC53_01759 ALC53_01759 ALC53_14194 ALC53_14194 ALC53_13710 ALC53_13710 ALC53_13733 ALC53_13733 ALC53_13551 ALC53_13551 ALC53_13228 ALC53_13228 ALC53_13559 ALC53_13559 ALC53_13375 ALC53_13375 ALC53_13279 ALC53_13279 ALC53_13302 ALC53_13302 ALC53_12700 ALC53_12700 ALC53_12299 ALC53_12299 ALC53_12226 ALC53_12226 ALC53_11812 ALC53_11812 ALC53_11793 ALC53_11793 ALC53_11836 ALC53_11836 ALC53_11750 ALC53_11750 ALC53_11841 ALC53_11841 ALC53_11856 ALC53_11856 ALC53_11632 ALC53_11632 ALC53_11161 ALC53_11161 ALC53_10487 ALC53_10487 ALC53_10555 ALC53_10555 ALC53_10773 ALC53_10773 ALC53_10615 ALC53_10615 ALC53_10616 ALC53_10616 ALC53_09517 ALC53_09517 ALC53_09805 ALC53_09805 ALC53_09809 ALC53_09809 ALC53_09726 ALC53_09726
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC53_0978140S ribosomal protein S19a. (153 aa)
ALC53_0957140S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (216 aa)
ALC53_09194Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (298 aa)
ALC53_0906840S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (277 aa)
ALC53_09419Protein argonaute-2; Belongs to the argonaute family. (1088 aa)
ALC53_07780Poly(U)-binding-splicing factor half pint. (593 aa)
ALC53_07873Interferon-inducible double stranded RNA-dependent protein kinase activator A. (336 aa)
ALC53_07709mTERF domain-containing protein 1, mitochondrial. (383 aa)
ALC53_07294Serine/threonine-protein kinase spk-1. (589 aa)
ALC53_0748939S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (148 aa)
ALC53_06927U4/U6.U5 tri-snRNP-associated protein 2. (507 aa)
ALC53_07492CS domain-containing protein. (188 aa)
ALC53_07100Uncharacterized protein. (639 aa)
ALC53_06849X-ray repair cross-complementing protein 5. (760 aa)
ALC53_06582Eukaryotic translation initiation factor 4H. (296 aa)
ALC53_06084Methylosome subunit pICln. (204 aa)
ALC53_06200Eukaryotic translation initiation factor 5. (446 aa)
ALC53_05970U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (301 aa)
ALC53_05810Uncharacterized protein. (2100 aa)
ALC53_05968U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1. (476 aa)
ALC53_06003F-box only protein 11. (922 aa)
ALC53_06015Eukaryotic translation initiation factor 2 subunit 3. (924 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
ALC53_05240Protein argonaute-2; Belongs to the argonaute family. (949 aa)
ALC53_10463Ribosome biogenesis protein BRX1 like protein. (339 aa)
ALC53_0485140S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (147 aa)
ALC53_04866Uncharacterized protein. (241 aa)
ALC53_04868Activator of basal transcription 1. (231 aa)
ALC53_04956Uncharacterized protein. (101 aa)
ALC53_04943Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (561 aa)
ALC53_04667PIH1 domain-containing protein 2. (650 aa)
ALC53_0420160S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (280 aa)
ALC53_03336Eukaryotic translation initiation factor 2 subunit 2. (401 aa)
ALC53_0334928S ribosomal protein S7, mitochondrial. (240 aa)
ALC53_0385860S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
ALC53_03229Periodic tryptophan protein 2 like protein. (806 aa)
ALC53_03478Protein suppressor of white apricot. (774 aa)
ALC53_02710Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (285 aa)
ALC53_0288630S ribosomal protein S11, chloroplastic. (213 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (243 aa)
ALC53_02954Ligatin. (580 aa)
ALC53_02680Small nuclear ribonucleoprotein G. (64 aa)
ALC53_02217Box C/D snoRNA protein 1. (332 aa)
ALC53_02110Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (322 aa)
ALC53_02337Peptidyl-prolyl cis-trans isomerase D. (373 aa)
ALC53_01635CUGBP Elav-like family member 2. (487 aa)
ALC53_01633Uncharacterized protein. (107 aa)
ALC53_02051Ribosomal RNA-processing protein 7 like protein A. (252 aa)
ALC53_01517Uncharacterized protein. (231 aa)
ALC53_02193Tankyrase-1. (939 aa)
ALC53_01175Putative ribosomal RNA methyltransferase CG11447. (246 aa)
ALC53_00837Nuclear fragile X mental retardation-interacting protein 1. (363 aa)
ALC53_01629CUGBP Elav-like family member 2. (113 aa)
ALC53_00942Protein crooked neck. (672 aa)
ALC53_01478MADF domain-containing protein. (279 aa)
ALC53_01412Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (978 aa)
ALC53_00760DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3784 aa)
ALC53_0096660S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (227 aa)
ALC53_00617Small nuclear ribonucleoprotein Sm D3. (142 aa)
ALC53_00261Putative ATP-dependent RNA helicase DDX20. (1228 aa)
ALC53_01083Survival motor neuron protein. (196 aa)
ALC53_00653Midasin. (603 aa)
ALC53_00421Suppressor of SWI4 1 like protein. (419 aa)
ALC53_00091Ribosome production factor 2 like protein. (314 aa)
ALC53_04850Uncharacterized protein. (967 aa)
ALC53_10699Endoribonuclease Dcr-1; Belongs to the helicase family. Dicer subfamily. (1918 aa)
ALC53_10679Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5331 aa)
ALC53_10472Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (287 aa)
ALC53_14045Uncharacterized protein. (634 aa)
ALC53_06565Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (116 aa)
ALC53_12874Eukaryotic translation initiation factor 4B. (590 aa)
ALC53_12847Pre-mRNA-splicing factor 18. (348 aa)
ALC53_11423Eukaryotic translation initiation factor 3 subunit M. (370 aa)
ALC53_08961Uncharacterized protein. (454 aa)
ALC53_08934CUGBP Elav-like family member 3. (228 aa)
ALC53_08938CUGBP Elav-like family member 5. (175 aa)
ALC53_08960CUGBP Elav-like family member 4. (168 aa)
ALC53_08937Uncharacterized protein. (183 aa)
ALC53_09168Pre-mRNA-splicing factor SYF1. (823 aa)
ALC53_08089Parafibromin. (515 aa)
ALC53_08962CUGBP Elav-like family member 4. (429 aa)
ALC53_07348Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (428 aa)
ALC53_06704Pre-mRNA-splicing factor ISY1 like protein. (270 aa)
ALC53_06712U4/U6 small nuclear ribonucleoprotein Prp31. (489 aa)
ALC53_06742Luc7-like protein 3. (378 aa)
ALC53_06741Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (703 aa)
ALC53_05614Pre-mRNA-processing-splicing factor 8. (2372 aa)
ALC53_05099Protein SHQ1 like protein. (522 aa)
ALC53_03734Pre-mRNA-processing factor 6. (931 aa)
ALC53_01759Eukaryotic translation initiation factor 3 subunit I. (326 aa)
ALC53_14194Survival of motor neuron protein-interacting protein 1. (198 aa)
ALC53_13710Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
ALC53_13733Splicing factor 3B subunit 1. (1323 aa)
ALC53_13551Density-regulated protein; Belongs to the DENR family. (200 aa)
ALC53_13228Gem-associated protein 5. (1314 aa)
ALC53_13559Zinc finger HIT domain-containing protein 3. (137 aa)
ALC53_13375Transformer-2 sex-determining protein. (406 aa)
ALC53_13279Splicing factor 3A subunit 2. (274 aa)
ALC53_13302tRNA selenocysteine 1-associated protein 1. (295 aa)
ALC53_12700Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (538 aa)
ALC53_12299Putative ATP-dependent RNA helicase DDX28. (632 aa)
ALC53_12226PIH1 domain-containing protein 1. (326 aa)
ALC53_11812Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (237 aa)
ALC53_11793Uncharacterized protein. (979 aa)
ALC53_11836Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (216 aa)
ALC53_11750Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family. (444 aa)
ALC53_11841RISC-loading complex subunit tarbp2. (872 aa)
ALC53_11856Putative RNA-binding protein Luc7-like 1. (364 aa)
ALC53_11632Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
ALC53_11161U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (175 aa)
ALC53_1048760S ribosomal protein L10. (219 aa)
ALC53_10555BTB/POZ domain-containing protein 9. (480 aa)
ALC53_10773Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1203 aa)
ALC53_10615Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family. (333 aa)
ALC53_10616Putative RNA helicase armi. (1129 aa)
ALC53_09517Pre-mRNA-processing factor 39. (1064 aa)
ALC53_09805Pre-mRNA-processing factor 6. (444 aa)
ALC53_09809Uncharacterized protein C20orf4 like protein. (372 aa)
ALC53_09726H/ACA ribonucleoprotein complex non-core subunit NAF1. (605 aa)
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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