STRINGSTRING
malY malY gshAB gshAB dapL dapL PatB PatB ilvE ilvE yrrT yrrT metC metC srpG srpG luxS luxS MsrC MsrC mtnN mtnN metK metK MetH MetH metC-2 metC-2 metB2 metB2 metE metE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
malYAminotransferase, class I/II; COG: COG1168; Pfam: PF00155; InterPro: IPR004839. (391 aa)
gshABGlutamate--cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily. (782 aa)
dapLTransaminase; COG: COG0436; Pfam: PF00155; InterPro: IPR004839. (392 aa)
PatBAminotransferase, class I/II; COG: COG1168; Pfam: PF00155; InterPro: IPR004839. (390 aa)
ilvEBranched-chain-amino-acid transaminase; COG: COG0115; Pfam: PF01063; InterPro: IPR001544. (340 aa)
yrrTMethyltransferase domain protein; Could be a S-adenosyl-L-methionine-dependent methyltransferase. (224 aa)
metCCystathionine beta-lyase; COG: COG0626; Pfam: PF01053; InterPro: IPR000277. (379 aa)
srpGPyridoxal-phosphate dependent protein; COG: COG0031; Pfam: PF00291; InterPro: IPR001926. (331 aa)
luxSS-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. (155 aa)
MsrCGAF domain protein; COG: COG1956. (167 aa)
mtnNMTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (250 aa)
metKMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (399 aa)
MetHHomocysteine S-methyltransferase; COG: COG0685; Pfam: PF02574,PF02219; InterPro: IPR003726. (617 aa)
metC-2Cys/Met metabolism PLP-dependent enzyme; COG: COG0626; Pfam: PF01053; InterPro: IPR000277. (390 aa)
metB2Putative cystathionine gamma-synthase; COG: COG0626; Pfam: PF01053; InterPro: IPR000277. (373 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (770 aa)
Your Current Organism:
Listeria grayi
NCBI taxonomy Id: 525367
Other names: L. grayi DSM 20601, Listeria grayi ATCC 19120, Listeria grayi DSM 20601, Listeria grayi str. DSM 20601, Listeria grayi strain DSM 20601
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