STRINGSTRING
Dbac_0812 Dbac_0812 Dbac_0813 Dbac_0813 Dbac_0814 Dbac_0814 Dbac_0815 Dbac_0815 Dbac_0816 Dbac_0816 Dbac_0817 Dbac_0817 Dbac_0818 Dbac_0818 Dbac_0819 Dbac_0819 phnN phnN Dbac_0821 Dbac_0821 Dbac_0825 Dbac_0825 Dbac_0826 Dbac_0826 Dbac_0827 Dbac_0827 Dbac_0828 Dbac_0828 phnC phnC Dbac_0856 Dbac_0856 phnC-2 phnC-2 Dbac_0858 Dbac_0858 Dbac_0859 Dbac_0859 Dbac_1991 Dbac_1991
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Dbac_0812Phophonate C-P lyase system transcriptional regulator PhnF, GntR family; KEGG: dde:Dde_3327 GntR family transcriptional regulator; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (240 aa)
Dbac_0813TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: dde:Dde_3328 alkylphosphonate utilization protein PhnG. (149 aa)
Dbac_0814TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: mrd:Mrad2831_3856 phosphonate C-P lyase system protein PhnH. (201 aa)
Dbac_0815PFAM: phosphonate metabolism; KEGG: rpc:RPC_1284 phosphonate metabolism. (371 aa)
Dbac_0816Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (284 aa)
Dbac_0817Phosphonate C-P lyase system protein PhnK; KEGG: ret:RHE_CH00163 phosphonates transport ATP- binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)
Dbac_0818KEGG: mlo:mlr9286 PhnL, phosphonates transport ATP- binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase. (230 aa)
Dbac_0819TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: dde:Dde_3334 amidohydrolase-like. (380 aa)
phnNPhosphonate metabolism protein/1,5- bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (187 aa)
Dbac_0821TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: azc:AZC_0705 putative acetyltransferase. (201 aa)
Dbac_0825PFAM: protein of unknown function DUF1045; KEGG: rce:RC1_0524 hypothetical protein. (234 aa)
Dbac_0826TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; amidohydrolase; KEGG: dde:Dde_3334 amidohydrolase-like. (378 aa)
Dbac_0827TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2888 phosphonate ABC transporter, inner membrane subunit. (267 aa)
Dbac_0828TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rfr:Rfer_0184 phosphonate-binding periplasmic protein. (321 aa)
phnCPhosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (280 aa)
Dbac_0856TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dde:Dde_3730 phosphonate-binding periplasmic protein. (338 aa)
phnC-2Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (264 aa)
Dbac_0858TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_1232 phosphonate ABC transporter, inner membrane subunit. (261 aa)
Dbac_0859TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_1233 phosphonate ABC transporter, inner membrane subunit. (263 aa)
Dbac_1991TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dde:Dde_0601 phosphonate-binding periplasmic protein. (307 aa)
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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