STRINGSTRING
VDBG_00428 VDBG_00428 VDBG_01263 VDBG_01263 VDBG_01291 VDBG_01291 VDBG_00233 VDBG_00233 VDBG_01920 VDBG_01920 VDBG_01921 VDBG_01921 VDBG_02944 VDBG_02944 VDBG_04593 VDBG_04593 VDBG_04832 VDBG_04832 VDBG_08962 VDBG_08962 VDBG_09779 VDBG_09779
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_00428MRC1 domain-containing protein. (1303 aa)
VDBG_01263Zn(2)-C6 fungal-type domain-containing protein. (625 aa)
VDBG_01291DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (249 aa)
VDBG_00233Topoisomerase 1-associated factor 1. (1413 aa)
VDBG_01920Predicted protein. (110 aa)
VDBG_01921Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (105 aa)
VDBG_02944Cnn_1N domain-containing protein. (738 aa)
VDBG_04593DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (221 aa)
VDBG_04832DNA replication complex GINS protein PSF1. (215 aa)
VDBG_08962DNA replication complex GINS protein PSF3. (182 aa)
VDBG_09779Zn(2)-C6 fungal-type domain-containing protein. (494 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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