STRINGSTRING
VDBG_01174 VDBG_01174 VDBG_00638 VDBG_00638 VDBG_02160 VDBG_02160 VDBG_01664 VDBG_01664 VDBG_08209 VDBG_08209
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_01174Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
VDBG_00638Transketolase. (591 aa)
VDBG_02160Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (284 aa)
VDBG_016646-phosphofructokinase. (716 aa)
VDBG_08209Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (345 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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