STRINGSTRING
VDBG_03557 VDBG_03557 VDBG_10130 VDBG_10130 VDBG_10123 VDBG_10123 VDBG_09307 VDBG_09307 VDBG_09137 VDBG_09137 VDBG_08817 VDBG_08817 VDBG_08639 VDBG_08639 VDBG_08567 VDBG_08567 VDBG_08460 VDBG_08460 VDBG_08345 VDBG_08345 VDBG_08213 VDBG_08213 VDBG_08212 VDBG_08212 VDBG_07583 VDBG_07583 VDBG_07461 VDBG_07461 VDBG_05980 VDBG_05980 VDBG_05813 VDBG_05813 VDBG_03780 VDBG_03780 VDBG_03779 VDBG_03779 VDBG_03729 VDBG_03729 VDBG_04155 VDBG_04155 VDBG_02566 VDBG_02566 VDBG_03077 VDBG_03077 VDBG_02946 VDBG_02946 VDBG_02058 VDBG_02058 VDBG_01613 VDBG_01613 VDBG_02302 VDBG_02302 VDBG_00723 VDBG_00723 VDBG_00637 VDBG_00637 VDBG_00397 VDBG_00397 VDBG_00367 VDBG_00367
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDBG_0355740S ribosomal protein S27a. (153 aa)
VDBG_10130Uncharacterized protein. (337 aa)
VDBG_10123BTB/POZ domain-containing protein. (306 aa)
VDBG_09307ApbA domain-containing protein. (117 aa)
VDBG_09137Uncharacterized protein. (479 aa)
VDBG_08817cAMP-dependent protein kinase; Belongs to the protein kinase superfamily. (442 aa)
VDBG_08639RING-box protein. (119 aa)
VDBG_08567Glycerate kinase. (344 aa)
VDBG_08460Uncharacterized protein. (692 aa)
VDBG_08345Uncharacterized protein. (246 aa)
VDBG_08213Uncharacterized protein. (98 aa)
VDBG_08212CIA30 family protein. (233 aa)
VDBG_07583Predicted protein. (150 aa)
VDBG_07461Uncharacterized protein. (918 aa)
VDBG_05980SKT5. (676 aa)
VDBG_05813Uncharacterized protein. (143 aa)
VDBG_03780Glycerol uptake protein; Belongs to the membrane-bound acyltransferase family. (277 aa)
VDBG_03779Uncharacterized protein. (193 aa)
VDBG_03729Uncharacterized protein. (736 aa)
VDBG_04155Uncharacterized protein. (508 aa)
VDBG_02566Integral membrane protein. (575 aa)
VDBG_03077PDCD2_C domain-containing protein. (433 aa)
VDBG_02946PRKCSH domain-containing protein. (538 aa)
VDBG_02058SKT5. (993 aa)
VDBG_01613AFG2. (609 aa)
VDBG_02302Predicted protein. (676 aa)
VDBG_00723Uncharacterized protein. (1481 aa)
VDBG_00637Uncharacterized protein. (384 aa)
VDBG_00397Uncharacterized protein. (874 aa)
VDBG_00367cAMP-dependent protein kinase regulatory subunit. (216 aa)
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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