(14 nodes) Pilin-like network (Pseudomonas benzenivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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protein homology

Your Input:
	SDG50930.1	Type IV fimbrial biogenesis protein FimT. (157 aa)
	SDG50960.1	Type IV fimbrial biogenesis protein FimT. (141 aa)
	SDG51105.1	Type IV pilus assembly protein PilE. (131 aa)
	SDG51139.1	Type IV fimbrial biogenesis protein FimT. (171 aa)
	SDG50798.1	Type IV pilus assembly protein PilE. (155 aa)
	SDG73221.1	PilS N terminal. (173 aa)
	SDG76877.1	General secretion pathway protein G. (145 aa)
	SDG76891.1	General secretion pathway protein H. (176 aa)
	SDG76915.1	General secretion pathway protein I. (129 aa)
	SDG76939.1	General secretion pathway protein J. (229 aa)
	SDG76966.1	General secretion pathway protein K. (321 aa)
	SDH68937.1	General secretion pathway protein G. (148 aa)
	SDH68964.1	General secretion pathway protein H. (188 aa)
	SDH99755.1	Type IV pilus assembly protein PilA. (61 aa)

Your Current Organism:

Pseudomonas benzenivorans

NCBI taxonomy Id: 556533
Other names: CIP 109857, DSM 8628, P. benzenivorans, Pseudomonas benzenivorans Lang et al. 2012 emend. Hameed et al. 2014, Pseudomonas sp. DSM 8628

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDG50798.1	SDG50930.1	SAMN05216603_10298	SAMN05216603_102103	Type IV pilus assembly protein PilE.	Type IV fimbrial biogenesis protein FimT.	0.931
SDG50798.1	SDG50960.1	SAMN05216603_10298	SAMN05216603_102104	Type IV pilus assembly protein PilE.	Type IV fimbrial biogenesis protein FimT.	0.649
SDG50798.1	SDG51139.1	SAMN05216603_10298	SAMN05216603_102110	Type IV pilus assembly protein PilE.	Type IV fimbrial biogenesis protein FimT.	0.674
SDG50798.1	SDG76877.1	SAMN05216603_10298	SAMN05216603_103363	Type IV pilus assembly protein PilE.	General secretion pathway protein G.	0.608
SDG50798.1	SDG76939.1	SAMN05216603_10298	SAMN05216603_103366	Type IV pilus assembly protein PilE.	General secretion pathway protein J.	0.490
SDG50798.1	SDH68937.1	SAMN05216603_10298	SAMN05216603_11228	Type IV pilus assembly protein PilE.	General secretion pathway protein G.	0.552
SDG50798.1	SDH68964.1	SAMN05216603_10298	SAMN05216603_11229	Type IV pilus assembly protein PilE.	General secretion pathway protein H.	0.731
SDG50798.1	SDH99755.1	SAMN05216603_10298	SAMN05216603_11882	Type IV pilus assembly protein PilE.	Type IV pilus assembly protein PilA.	0.872
SDG50930.1	SDG50798.1	SAMN05216603_102103	SAMN05216603_10298	Type IV fimbrial biogenesis protein FimT.	Type IV pilus assembly protein PilE.	0.931
SDG50930.1	SDG51105.1	SAMN05216603_102103	SAMN05216603_102109	Type IV fimbrial biogenesis protein FimT.	Type IV pilus assembly protein PilE.	0.805
SDG50930.1	SDH99755.1	SAMN05216603_102103	SAMN05216603_11882	Type IV fimbrial biogenesis protein FimT.	Type IV pilus assembly protein PilA.	0.494
SDG50960.1	SDG50798.1	SAMN05216603_102104	SAMN05216603_10298	Type IV fimbrial biogenesis protein FimT.	Type IV pilus assembly protein PilE.	0.649
SDG50960.1	SDG51105.1	SAMN05216603_102104	SAMN05216603_102109	Type IV fimbrial biogenesis protein FimT.	Type IV pilus assembly protein PilE.	0.859
SDG50960.1	SDG51139.1	SAMN05216603_102104	SAMN05216603_102110	Type IV fimbrial biogenesis protein FimT.	Type IV fimbrial biogenesis protein FimT.	0.772
SDG50960.1	SDH99755.1	SAMN05216603_102104	SAMN05216603_11882	Type IV fimbrial biogenesis protein FimT.	Type IV pilus assembly protein PilA.	0.436
SDG51105.1	SDG50930.1	SAMN05216603_102109	SAMN05216603_102103	Type IV pilus assembly protein PilE.	Type IV fimbrial biogenesis protein FimT.	0.805
SDG51105.1	SDG50960.1	SAMN05216603_102109	SAMN05216603_102104	Type IV pilus assembly protein PilE.	Type IV fimbrial biogenesis protein FimT.	0.859
SDG51105.1	SDG51139.1	SAMN05216603_102109	SAMN05216603_102110	Type IV pilus assembly protein PilE.	Type IV fimbrial biogenesis protein FimT.	0.790
SDG51105.1	SDG76877.1	SAMN05216603_102109	SAMN05216603_103363	Type IV pilus assembly protein PilE.	General secretion pathway protein G.	0.552
SDG51105.1	SDG76939.1	SAMN05216603_102109	SAMN05216603_103366	Type IV pilus assembly protein PilE.	General secretion pathway protein J.	0.490

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