12 items (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_15335	Ubiquitin-60S ribosomal protein L40. (128 aa)
	N303_03191	Mitogen-activated protein kinase. (424 aa)
	N303_14746	Lymphocyte antigen 96. (155 aa)
	N303_11545	Ubiquitin-40S ribosomal protein S27a. (140 aa)
	N303_01192	Proto-oncogene c-Rel. (591 aa)
	N303_00910	Dual specificity protein phosphatase 4; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (247 aa)
	N303_09620	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (670 aa)
	N303_08449	Dual specificity mitogen-activated protein kinase kinase 2; Belongs to the protein kinase superfamily. (367 aa)
	N303_01788	NF-kappa-B inhibitor alpha. (238 aa)
	N303_03760	Myeloid differentiation primary response protein MyD88. (234 aa)
	N303_04620	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (545 aa)
	N303_09414	Transcription factor AP-1; Belongs to the bZIP family. (314 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00910	N303_03191	A0A091G899	A0A091FJY8	Dual specificity protein phosphatase 4; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.926
N303_00910	N303_09414	A0A091G899	A0A091GJT1	Dual specificity protein phosphatase 4; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Transcription factor AP-1; Belongs to the bZIP family.	0.427
N303_00910	N303_15335	A0A091G899	A0A091GI48	Dual specificity protein phosphatase 4; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Ubiquitin-60S ribosomal protein L40.	0.468
N303_01192	N303_01788	A0A091FVA4	A0A091GA32	Proto-oncogene c-Rel.	NF-kappa-B inhibitor alpha.	0.988
N303_01192	N303_03191	A0A091FVA4	A0A091FJY8	Proto-oncogene c-Rel.	Mitogen-activated protein kinase.	0.859
N303_01192	N303_03760	A0A091FVA4	A0A091GJB8	Proto-oncogene c-Rel.	Myeloid differentiation primary response protein MyD88.	0.801
N303_01192	N303_04620	A0A091FVA4	A0A091GHS8	Proto-oncogene c-Rel.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.660
N303_01192	N303_09414	A0A091FVA4	A0A091GJT1	Proto-oncogene c-Rel.	Transcription factor AP-1; Belongs to the bZIP family.	0.478
N303_01192	N303_09620	A0A091FVA4	A0A091G4L8	Proto-oncogene c-Rel.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.951
N303_01192	N303_11545	A0A091FVA4	A0A091FV94	Proto-oncogene c-Rel.	Ubiquitin-40S ribosomal protein S27a.	0.767
N303_01192	N303_15335	A0A091FVA4	A0A091GI48	Proto-oncogene c-Rel.	Ubiquitin-60S ribosomal protein L40.	0.566
N303_01788	N303_01192	A0A091GA32	A0A091FVA4	NF-kappa-B inhibitor alpha.	Proto-oncogene c-Rel.	0.988
N303_01788	N303_03191	A0A091GA32	A0A091FJY8	NF-kappa-B inhibitor alpha.	Mitogen-activated protein kinase.	0.599
N303_01788	N303_03760	A0A091GA32	A0A091GJB8	NF-kappa-B inhibitor alpha.	Myeloid differentiation primary response protein MyD88.	0.688
N303_01788	N303_04620	A0A091GA32	A0A091GHS8	NF-kappa-B inhibitor alpha.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.808
N303_01788	N303_09414	A0A091GA32	A0A091GJT1	NF-kappa-B inhibitor alpha.	Transcription factor AP-1; Belongs to the bZIP family.	0.597
N303_01788	N303_09620	A0A091GA32	A0A091G4L8	NF-kappa-B inhibitor alpha.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.996
N303_01788	N303_11545	A0A091GA32	A0A091FV94	NF-kappa-B inhibitor alpha.	Ubiquitin-40S ribosomal protein S27a.	0.972
N303_01788	N303_15335	A0A091GA32	A0A091GI48	NF-kappa-B inhibitor alpha.	Ubiquitin-60S ribosomal protein L40.	0.932
N303_03191	N303_00910	A0A091FJY8	A0A091G899	Mitogen-activated protein kinase.	Dual specificity protein phosphatase 4; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.926