28 items (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N303_02970	Replication protein A 14 kDa subunit. (116 aa)
	N303_02572	Centromere protein S. (137 aa)
	N303_08424	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (963 aa)
	N303_04375	Structure-specific endonuclease subunit SLX4. (415 aa)
	N303_10364	Nuclear transport factor 2. (125 aa)
	N303_05500	Fanconi anemia group B protein. (876 aa)
	N303_08556	Fanconi anemia-associated protein of 100 kDa. (353 aa)
	N303_04376	Structure-specific endonuclease subunit SLX4. (223 aa)
	N303_05106	Meiosis-specific with OB domain-containing protein. (469 aa)
	N303_06733	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (559 aa)
	N303_10972	Fanconi anemia group I protein. (1310 aa)
	N303_10207	Proline and serine-rich protein 1. (946 aa)
	N303_09427	Ubiquitin carboxyl-terminal hydrolase. (767 aa)
	N303_07403	Fanconi anemia-associated protein of 24 kDa. (206 aa)
	N303_15336	KxDL motif-containing protein 1. (176 aa)
	N303_08692	Fanconi anemia group D2 protein. (1435 aa)
	N303_11081	5' exonuclease Apollo. (364 aa)
	N303_14635	Fanconi anemia group M protein. (1836 aa)
	N303_05038	Replication protein A 32 kDa subunit. (232 aa)
	N303_02440	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2671 aa)
	N303_15686	Crossover junction endonuclease EME1. (490 aa)
	N303_12133	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (603 aa)
	N303_03769	WD repeat-containing protein 48. (677 aa)
	N303_11201	Fanconi anemia group G protein. (586 aa)
	N303_11545	Ubiquitin-40S ribosomal protein S27a. (140 aa)
	N303_01189	E3 ubiquitin-protein ligase FANCL. (362 aa)
	N303_02186	Polyubiquitin-C. (228 aa)
	N303_10005	Glutamine-rich protein 2. (211 aa)

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_01189	N303_02440	A0A091FUR0	A0A091H0P1	E3 ubiquitin-protein ligase FANCL.	Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.	0.589
N303_01189	N303_02572	A0A091FUR0	A0A091G7F1	E3 ubiquitin-protein ligase FANCL.	Centromere protein S.	0.964
N303_01189	N303_02970	A0A091FUR0	A0A091G6H1	E3 ubiquitin-protein ligase FANCL.	Replication protein A 14 kDa subunit.	0.591
N303_01189	N303_03769	A0A091FUR0	A0A091FYM8	E3 ubiquitin-protein ligase FANCL.	WD repeat-containing protein 48.	0.888
N303_01189	N303_04375	A0A091FUR0	A0A091FQH2	E3 ubiquitin-protein ligase FANCL.	Structure-specific endonuclease subunit SLX4.	0.669
N303_01189	N303_04376	A0A091FUR0	A0A091GAL3	E3 ubiquitin-protein ligase FANCL.	Structure-specific endonuclease subunit SLX4.	0.669
N303_01189	N303_05500	A0A091FUR0	A0A091FPS4	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia group B protein.	0.998
N303_01189	N303_06733	A0A091FUR0	A0A091G2E4	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.	0.998
N303_01189	N303_07403	A0A091FUR0	A0A091GJ60	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia-associated protein of 24 kDa.	0.997
N303_01189	N303_08424	A0A091FUR0	A0A091FR16	E3 ubiquitin-protein ligase FANCL.	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.775
N303_01189	N303_08556	A0A091FUR0	A0A091G5C6	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia-associated protein of 100 kDa.	0.983
N303_01189	N303_08692	A0A091FUR0	A0A091GMK3	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia group D2 protein.	0.995
N303_01189	N303_09427	A0A091FUR0	A0A091GIN6	E3 ubiquitin-protein ligase FANCL.	Ubiquitin carboxyl-terminal hydrolase.	0.917
N303_01189	N303_10005	A0A091FUR0	A0A091FR76	E3 ubiquitin-protein ligase FANCL.	Glutamine-rich protein 2.	0.965
N303_01189	N303_10364	A0A091FUR0	A0A091FQE5	E3 ubiquitin-protein ligase FANCL.	Nuclear transport factor 2.	0.990
N303_01189	N303_10972	A0A091FUR0	A0A091G1W6	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia group I protein.	0.994
N303_01189	N303_11081	A0A091FUR0	A0A091GMX3	E3 ubiquitin-protein ligase FANCL.	5' exonuclease Apollo.	0.625
N303_01189	N303_11201	A0A091FUR0	A0A091FWD9	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia group G protein.	0.998
N303_01189	N303_14635	A0A091FUR0	A0A091GQP0	E3 ubiquitin-protein ligase FANCL.	Fanconi anemia group M protein.	0.999
N303_01189	N303_15686	A0A091FUR0	A0A091G7W0	E3 ubiquitin-protein ligase FANCL.	Crossover junction endonuclease EME1.	0.610