STRINGSTRING
atoC-2 atoC-2 RNAN_0525 RNAN_0525 atoC atoC RNAN_0399 RNAN_0399 pleD-2 pleD-2 RNAN_0345 RNAN_0345 RNAN_0295 RNAN_0295 yesN yesN RNAN_0281 RNAN_0281 glnG glnG cpxR cpxR RNAN_0184 RNAN_0184 RNAN_0182 RNAN_0182 RNAN_0132 RNAN_0132 RNAN_0050 RNAN_0050 ompR ompR RNAN_2469 RNAN_2469 arcB arcB arcA arcA RNAN_2349 RNAN_2349 cheY-3 cheY-3 RNAN_2337 RNAN_2337 RNAN_2142 RNAN_2142 rstA rstA RNAN_1689 RNAN_1689 RNAN_1651 RNAN_1651 RNAN_1646 RNAN_1646 degU degU cheV cheV atoC-4 atoC-4 cheY-2 cheY-2 cheB cheB agmR agmR RNAN_1137 RNAN_1137 copR copR phoB-2 phoB-2 nodW nodW RNAN_0959 RNAN_0959 narP narP RNAN_0860 RNAN_0860 algR algR cheY cheY atoC-3 atoC-3 cusR cusR basR basR RNAN_3301 RNAN_3301 RNAN_3291 RNAN_3291 RNAN_3197 RNAN_3197 phoP phoP barA barA atoC-5 atoC-5 RNAN_2962 RNAN_2962 agmR-2 agmR-2 RNAN_2918 RNAN_2918 uvrY uvrY RNAN_2677 RNAN_2677 RNAN_2560 RNAN_2560
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atoC-2Acetoacetate metabolism regulatory protein AtoC. (440 aa)
RNAN_0525Two-component system, LytT family, response regulator. (263 aa)
atoCAcetoacetate metabolism regulatory protein AtoC. (451 aa)
RNAN_0399Response regulator receiver modulated serine phosphatase. (442 aa)
pleD-2Two-component system, cell cycle response regulator. (424 aa)
RNAN_0345Hypothetical protein. (540 aa)
RNAN_0295Hypothetical protein. (538 aa)
yesNTwo-component system, response regulator YesN. (121 aa)
RNAN_0281Hypothetical protein. (879 aa)
glnGNitrogen regulation protein NR; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (469 aa)
cpxRTwo-component system, OmpR family, response regulator CpxR. (230 aa)
RNAN_0184Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (739 aa)
RNAN_0182Hypothetical protein. (722 aa)
RNAN_0132Metal dependent phosphohydrolase. (508 aa)
RNAN_0050DNA-binding response regulator. (231 aa)
ompRTwo-component system, OmpR family, phosphate regulon response regulator OmpR. (241 aa)
RNAN_2469Two-component system, unclassified family, sensor histidine kinase and response regulator. (1186 aa)
arcBTwo-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB. (762 aa)
arcATwo-component system, OmpR family, aerobic respiration control protein ArcA. (235 aa)
RNAN_2349Response regulator. (337 aa)
cheY-3Two-component system, chemotaxis family, response regulator CheY. (141 aa)
RNAN_2337Hypothetical protein. (212 aa)
RNAN_2142Two-component system, LytT family, response regulator LytT. (272 aa)
rstATwo-component system, OmpR family, response regulator RstA. (230 aa)
RNAN_1689Two component, sigma54 specific, transcriptional regulator, Fis family. (449 aa)
RNAN_1651Response regulator. (519 aa)
RNAN_1646LytR/AlgR family transcriptional regulator. (247 aa)
degUTranscriptional regulatory protein degU. (214 aa)
cheVTwo-component system, chemotaxis family, response regulator CheV. (309 aa)
atoC-4Acetoacetate metabolism regulatory protein AtoC. (456 aa)
cheY-2Two-component system, chemotaxis family, response regulator CheY. (127 aa)
cheBTwo-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (385 aa)
agmRGlycerol metabolism activator. (213 aa)
RNAN_1137Sensor protein. (1143 aa)
copRTranscriptional activator protein CopR. (177 aa)
phoB-2Two-component system, OmpR family, phosphate regulon response regulator PhoB. (228 aa)
nodWNodulation protein W. (206 aa)
RNAN_0959Transcriptional regulatory protein. (126 aa)
narPNitrate/nitrite response regulator protein homolog. (217 aa)
RNAN_0860Response regulator receiver modulated diguanylate cyclase. (542 aa)
algRTwo-component system, LytT family, response regulator AlgR. (235 aa)
cheYChemotaxis protein CheY homolog. (123 aa)
atoC-3Acetoacetate metabolism regulatory protein AtoC. (453 aa)
cusRTwo-component system, OmpR family, copper resistance phosphate regulon response regulator CusR. (228 aa)
basRTwo-component system, OmpR family, response regulator BasR. (222 aa)
RNAN_3301Two-component system, response regulator, stage 0 sporulation protein F. (127 aa)
RNAN_3291Hypothetical protein. (920 aa)
RNAN_3197Response regulator with TPR repeat. (543 aa)
phoPTwo-component system, OmpR family, response regulator PhoP. (225 aa)
barATwo-component system, NarL family, sensor histidine kinase BarA. (896 aa)
atoC-5Acetoacetate metabolism regulatory protein AtoC. (446 aa)
RNAN_2962Hypothetical protein. (1183 aa)
agmR-2Glycerol metabolism activator. (225 aa)
RNAN_2918Two-component system, LytT family, response regulator LytT. (243 aa)
uvrYTwo-component system, NarL family, invasion response regulator UvrY. (193 aa)
RNAN_2677DNA-binding response regulator, LuxR family protein. (198 aa)
RNAN_2560Response regulator receiver protein. (129 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.