STRINGSTRING
envZ envZ RNAN_2469 RNAN_2469 arcB arcB kinA kinA RNAN_0051 RNAN_0051 RNAN_0083 RNAN_0083 RNAN_0195 RNAN_0195 ntrB ntrB RNAN_0281 RNAN_0281 RNAN_0284 RNAN_0284 RNAN_0305 RNAN_0305 RNAN_0478 RNAN_0478 RNAN_0498 RNAN_0498 RNAN_0524 RNAN_0524 ntrY ntrY kinB kinB mutL mutL algZ algZ RNAN_0858 RNAN_0858 RNAN_0861 RNAN_0861 narX narX RNAN_0963 RNAN_0963 phoR phoR RNAN_1105 RNAN_1105 RNAN_1137 RNAN_1137 RNAN_1272 RNAN_1272 cheA cheA RNAN_1386 RNAN_1386 RNAN_1574 RNAN_1574 RNAN_1597 RNAN_1597 RNAN_1691 RNAN_1691 RNAN_1644 RNAN_1644 rstB rstB parE parE RNAN_2125 RNAN_2125 RNAN_2141 RNAN_2141 htpG htpG cusS cusS qseC qseC RNAN_3291 RNAN_3291 phoQ phoQ barA barA RNAN_2962 RNAN_2962 desK desK gyrB gyrB RNAN_2561 RNAN_2561
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
envZTwo-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. (434 aa)
RNAN_2469Two-component system, unclassified family, sensor histidine kinase and response regulator. (1186 aa)
arcBTwo-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB. (762 aa)
kinATwo-component system, sporulation sensor kinase A. (540 aa)
RNAN_0051Hypothetical protein. (414 aa)
RNAN_0083Hypothetical protein. (899 aa)
RNAN_0195Two-component system, OmpR family, sensor kinase. (454 aa)
ntrBNitrogen regulation protein ntrB. (335 aa)
RNAN_0281Hypothetical protein. (879 aa)
RNAN_0284Signal transduction histidine kinase. (582 aa)
RNAN_0305Two-component hybrid sensor and regulator. (661 aa)
RNAN_0478Sensor signal transduction histidine kinase. (674 aa)
RNAN_0498Hypothetical protein. (1095 aa)
RNAN_0524Hypothetical protein. (353 aa)
ntrYTwo-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY. (444 aa)
kinBTwo-component system, sporulation sensor kinase B. (616 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (592 aa)
algZTwo-component system, LytT family, sensor histidine kinase AlgZ. (344 aa)
RNAN_0858Sensor histidine kinase. (455 aa)
RNAN_0861PAS fold family. (530 aa)
narXTwo-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX. (594 aa)
RNAN_0963Hypothetical protein. (564 aa)
phoRTwo-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (441 aa)
RNAN_1105Sensor histidine kinase. (487 aa)
RNAN_1137Sensor protein. (1143 aa)
RNAN_1272Hypothetical protein. (695 aa)
cheATwo-component system, chemotaxis family, sensor kinase CheA. (730 aa)
RNAN_1386Two-component system, sensor histidine kinase FlrB. (343 aa)
RNAN_1574Signal transduction histidine kinase. (230 aa)
RNAN_1597Two-component system sensor protein. (380 aa)
RNAN_1691Two-component system, NtrC family, sensor histidine kinase GlrK. (472 aa)
RNAN_1644Two-component system, LytT family, sensor kinase. (349 aa)
rstBTwo-component system, OmpR family, sensor histidine kinase RstB. (402 aa)
parETopoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (631 aa)
RNAN_2125Hypothetical protein. (638 aa)
RNAN_2141Two-component system, LytT family, sensor kinase. (360 aa)
htpGMolecular chaperone HtpG; Molecular chaperone. Has ATPase activity. (644 aa)
cusSSensor kinase cusS; Member of a two-component regulatory system. (450 aa)
qseCTwo-component system, OmpR family, sensor histidine kinase QseC. (464 aa)
RNAN_3291Hypothetical protein. (920 aa)
phoQTwo-component system, OmpR family, sensor histidine kinase PhoQ. (426 aa)
barATwo-component system, NarL family, sensor histidine kinase BarA. (896 aa)
RNAN_2962Hypothetical protein. (1183 aa)
desKTwo-component system, NarL family, sensor histidine kinase DesK. (381 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (805 aa)
RNAN_2561Multi-sensor signal transduction histidine kinase. (619 aa)
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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