STRINGSTRING
GSDME GSDME rag1 rag1 rag2 rag2 ENSLBEP00000001627 ENSLBEP00000001627 LOC109984753 LOC109984753 LOC109989921 LOC109989921 hmgb1 hmgb1 ubp1 ubp1 hmgb2 hmgb2 ENSLBEP00000005142 ENSLBEP00000005142 LOC114921807 LOC114921807 LOC110002918 LOC110002918 hp1bp3 hp1bp3 ENSLBEP00000008377 ENSLBEP00000008377 hint3 hint3 ubtf ubtf LOC109980222 LOC109980222 ENSLBEP00000013225 ENSLBEP00000013225 ENSLBEP00000013333 ENSLBEP00000013333 LOC109994174 LOC109994174 LOC109996475 LOC109996475 ENSLBEP00000017995 ENSLBEP00000017995 fbxo15 fbxo15 LOC109986783 LOC109986783 ENSLBEP00000021315 ENSLBEP00000021315 LOC109994852 LOC109994852 ENSLBEP00000022806 ENSLBEP00000022806 ENSLBEP00000025505 ENSLBEP00000025505 dffb dffb ENSLBEP00000026274 ENSLBEP00000026274 ENSLBEP00000026702 ENSLBEP00000026702 taf1b taf1b LOC109988032 LOC109988032 ENSLBEP00000027622 ENSLBEP00000027622 ENSLBEP00000028264 ENSLBEP00000028264 ENSLBEP00000029859 ENSLBEP00000029859 ENSLBEP00000030270 ENSLBEP00000030270 HINT1 HINT1 LOC109987411 LOC109987411 LOC109987409 LOC109987409 ENSLBEP00000032697 ENSLBEP00000032697 ENSLBEP00000032891 ENSLBEP00000032891 LOC110003493 LOC110003493 LOC110005468 LOC110005468 LOC109991630 LOC109991630 glod5 glod5 LOC109984533 LOC109984533 LOC109983504 LOC109983504
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GSDMEGasdermin E. (531 aa)
rag1V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1066 aa)
rag2Recombination activating gene 2. (533 aa)
ENSLBEP00000001627Wu:fj64h06. (809 aa)
LOC109984753High mobility group box 1b. (204 aa)
LOC109989921Uncharacterized protein. (475 aa)
hmgb1High mobility group box 1a. (205 aa)
ubp1Upstream binding protein 1. (543 aa)
hmgb2High mobility group box 2a. (216 aa)
ENSLBEP00000005142Uncharacterized protein. (236 aa)
LOC114921807H15 domain-containing protein. (204 aa)
LOC110002918H15 domain-containing protein. (201 aa)
hp1bp3Heterochromatin protein 1, binding protein 3. (631 aa)
ENSLBEP00000008377H15 domain-containing protein. (128 aa)
hint3Histidine triad nucleotide binding protein 3. (168 aa)
ubtfUpstream binding transcription factor. (709 aa)
LOC109980222Histidine triad nucleotide binding protein 1. (126 aa)
ENSLBEP00000013225HMG box domain-containing protein. (72 aa)
ENSLBEP00000013333annotation not available (96 aa)
LOC109994174HIT domain-containing protein. (149 aa)
LOC109996475Germ cell nuclear acidic peptidase. (613 aa)
ENSLBEP00000017995H15 domain-containing protein. (174 aa)
fbxo15F-box protein 15. (470 aa)
LOC109986783H1 histone family, member 0. (199 aa)
ENSLBEP00000021315H15 domain-containing protein. (96 aa)
LOC109994852Si:ch211-103n10.5. (187 aa)
ENSLBEP00000022806HMG box domain-containing protein. (118 aa)
ENSLBEP00000025505H15 domain-containing protein. (181 aa)
dffbDNA fragmentation factor, beta polypeptide (caspase-activated DNase). (346 aa)
ENSLBEP00000026274H15 domain-containing protein. (132 aa)
ENSLBEP00000026702H15 domain-containing protein. (125 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (585 aa)
LOC109988032Uncharacterized protein. (459 aa)
ENSLBEP00000027622H15 domain-containing protein. (163 aa)
ENSLBEP00000028264annotation not available (117 aa)
ENSLBEP00000029859H15 domain-containing protein. (150 aa)
ENSLBEP00000030270H15 domain-containing protein. (115 aa)
HINT1Histidine triad nucleotide-binding protein 1-like. (126 aa)
LOC109987411Histone H1-like. (196 aa)
LOC109987409H15 domain-containing protein. (201 aa)
ENSLBEP00000032697H15 domain-containing protein. (114 aa)
ENSLBEP00000032891H15 domain-containing protein. (184 aa)
LOC110003493H15 domain-containing protein. (210 aa)
LOC110005468H15 domain-containing protein. (210 aa)
LOC109991630Histidine triad nucleotide binding protein 2. (152 aa)
glod5Glyoxalase domain containing 5. (167 aa)
LOC109984533Grainyhead-like transcription factor 2b. (597 aa)
LOC109983504Transcription factor CP2-like 1. (471 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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