(18 nodes) Caprolactam degradation network (Pseudomonas peli)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	SCW69432.1	Alkane 1-monooxygenase. (379 aa)
	SCW29738.1	enoyl-CoA hydratase. (229 aa)
	SCW29819.1	Short chain enoyl-CoA hydratase. (714 aa)
	SCW29948.1	Acetyl esterase/lipase. (309 aa)
	SCW30845.1	Enoyl-CoA hydratase/carnithine racemase. (263 aa)
	fadB	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
	SCW40100.1	Transcriptional regulator, AraC family with amidase-like domain. (315 aa)
	SCW42391.1	Transcriptional regulator, AraC family with amidase-like domain. (334 aa)
	SCW60513.1	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	SCW61636.1	Enoyl-CoA hydratase/carnithine racemase. (367 aa)
	SCW64273.1	Hypothetical protein. (734 aa)
	SCW67341.1	Gluconolactonase. (353 aa)
	SCW69172.1	Transcriptional regulator, AraC family. (326 aa)
	SCW78796.1	Transcriptional regulator, AraC family with amidase-like domain. (367 aa)
	SCW81592.1	Short chain enoyl-CoA hydratase. (257 aa)
	SCW85249.1	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
	SCW86577.1	Transcriptional regulator, AraC family with amidase-like domain. (323 aa)
	SCW88531.1	Cyclohexanone monooxygenase. (517 aa)

Your Current Organism:

Pseudomonas peli

NCBI taxonomy Id: 592361
Other names: DSM 17833, LMG 23201, LMG:23201, P. peli, Pseudomonas peli Vanparys et al. 2006, Pseudomonas sp. R-20815, strain R-20805

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCW29738.1	SCW29819.1	SAMN05216370_0226	SAMN05216370_0235	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase.	0.747
SCW29738.1	SCW30845.1	SAMN05216370_0226	SAMN05216370_0320	enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.718
SCW29738.1	SCW60513.1	SAMN05216370_0226	SAMN05216370_2082	enoyl-CoA hydratase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.729
SCW29738.1	SCW61636.1	SAMN05216370_0226	SAMN05216370_2180	enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.662
SCW29738.1	SCW81592.1	SAMN05216370_0226	SAMN05216370_3683	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase.	0.593
SCW29738.1	SCW85249.1	SAMN05216370_0226	SAMN05216370_4014	enoyl-CoA hydratase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.840
SCW29738.1	fadB	SAMN05216370_0226	SAMN05216370_0422	enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.	0.781
SCW29819.1	SCW29738.1	SAMN05216370_0235	SAMN05216370_0226	Short chain enoyl-CoA hydratase.	enoyl-CoA hydratase.	0.747
SCW29819.1	SCW30845.1	SAMN05216370_0235	SAMN05216370_0320	Short chain enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.772
SCW29819.1	SCW60513.1	SAMN05216370_0235	SAMN05216370_2082	Short chain enoyl-CoA hydratase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.733
SCW29819.1	SCW61636.1	SAMN05216370_0235	SAMN05216370_2180	Short chain enoyl-CoA hydratase.	Enoyl-CoA hydratase/carnithine racemase.	0.684
SCW29819.1	SCW69432.1	SAMN05216370_0235	SAMN05216370_2881	Short chain enoyl-CoA hydratase.	Alkane 1-monooxygenase.	0.504
SCW29819.1	SCW81592.1	SAMN05216370_0235	SAMN05216370_3683	Short chain enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase.	0.693
SCW29819.1	SCW85249.1	SAMN05216370_0235	SAMN05216370_4014	Short chain enoyl-CoA hydratase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.772
SCW29819.1	SCW88531.1	SAMN05216370_0235	SAMN05216370_4322	Short chain enoyl-CoA hydratase.	Cyclohexanone monooxygenase.	0.516
SCW29819.1	fadB	SAMN05216370_0235	SAMN05216370_0422	Short chain enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.	0.876
SCW29948.1	SCW88531.1	SAMN05216370_0248	SAMN05216370_4322	Acetyl esterase/lipase.	Cyclohexanone monooxygenase.	0.803
SCW30845.1	SCW29738.1	SAMN05216370_0320	SAMN05216370_0226	Enoyl-CoA hydratase/carnithine racemase.	enoyl-CoA hydratase.	0.718
SCW30845.1	SCW29819.1	SAMN05216370_0320	SAMN05216370_0235	Enoyl-CoA hydratase/carnithine racemase.	Short chain enoyl-CoA hydratase.	0.772
SCW30845.1	SCW60513.1	SAMN05216370_0320	SAMN05216370_2082	Enoyl-CoA hydratase/carnithine racemase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.622